Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02163 ATGTCGCTGCTCGCCGTTTCCACCACTTTAACCGGTGGGTTGAAATGGCTGCTTGTGTTGTTGTCTTGCATGGTGTGGTTTGTGGTTGATTATGGTGCGTGTGGTAGAGCACTGGAACTTGAAGCACCTTATTTGTCTCCAGCTGCAGCACCTGTTGCTGTTGATGATCTGCCACTGCCGGCAAATGCTCATGGTTTGAAGCATTTGCCTGCACCAATTCCGTCACGTGCCAATTTCACCAAAGGGAGAGGAGAATTACAACCTCCGGTTTCCGGGTTTAAGAATATTGCCCCTATGCATCCCATTGCTGATGCAATTCCTTCTGCTCTCGCTCAGCCGCCATTGTCCCCTTATGCCTCCGATTGTTGCAAACAAGACATGGTGTGGAAACGAGGCAGTGAGGCTTGCCACTGTGCTTATCCCATAAAGCTAGACCTGCTTCTTTTGAATGTCTCTCAAAACCCCGACTGGAATGTTTTTCTTGATGATTTGGCCACCCAACTTGGGCTGCAGACTACACAAATTGAAATTATTAAATTCTATCTACTCAGCTTATCGATGTTGAATATATCGATGGATATCACTCCGCATAAAGGGATCGGTTTCTCGGTCGAAGAAGCGGCTAAAATAAACTCGTCACTTTTATGGCATAAGGTTCAACTAGATCGCAGATTTGTTGGCGACTACAAAGTCCTCAATATAACCTGGTTTAAACCTCCACCTCCTTCTCCAGCTCCTACAATTGCTACATCACCTACAAAAGCTCCTCAAAGACGAGCACCTACAACTACATTATCGAGTACTTCAGACAGGGGAAGGCATTCAAACTTGCTTCTTATTCTTGGAATTGTCATTGGCGTACTCTTCATTTCCATTGTATGTGTACTTATACTTTGCTTATGCACGATGAGGCCAAAAACAAAAACACCTCCCACAGAAACCGAAAAGCCAAGGACAGAAAGTGCAGTTCCAGCTGTTGGGTCTCTTCCCCATCCAACCAGTACACGGTTTATTGCTTATGAAGAACTTAAAGAAGCAACTAATAATTTTGAACCAGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGACTTACTAGTGGAGGGCAACAGGGTGACAAAGAATTTTTGGTTGAAGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAGCTAGTGGGATACTATAGCAACCGTGACTCGTCACAAAATCTACTTTGCTATGAGCTTGTTCCGAATGGAAGTTTGGAGGCGTGGCTTCATGGTCCCCTTGGAATAAATTGCCCTTTGGATTGGGACACCAGAATGAAGATCGCCCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCTGTGTTATACACAGAGATTTCAAGGCATCCAACATATTGCTCGAGAACAACTTTCATGCTAAAGTTGCAGATTTCGGTCTAGCTAAACAGGCACCTGAAGGCAGAGCTAATTATCTATCTACTAGAGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCTATGACCGGACACCTACTTGTTAAAAGCGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGTTGACAGGAAGGAAGCCAGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTAGAAGAACTTGCTGATCTAAGGCTTGGGGGAAGGTACCCAAAGGAAGATTTTGTACGTGTCTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCGCTTAAAATGGTGCAGCGGATCACAGAATCTCATGATCCTGTGTTACCCTCATCCAATACACGGCCCAACCTGAGACAGTCCTCTACCACTTATGAGTCTGATGGGACATCTTCAATGTTTTCTTCGGGTCCTTACTCTGGTCTAAGTACCTTTGACTATGACAACATTTCGAGGACGGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2085 0.4504 MSLLAVSTTLTGGLKWLLVLLSCMVWFVVDYGACGRALELEAPYLSPAAAPVAVDDLPLPANAHGLKHLPAPIPSRANFTKGRGELQPPVSGFKNIAPMHPIADAIPSALAQPPLSPYASDCCKQDMVWKRGSEACHCAYPIKLDLLLLNVSQNPDWNVFLDDLATQLGLQTTQIEIIKFYLLSLSMLNISMDITPHKGIGFSVEEAAKINSSLLWHKVQLDRRFVGDYKVLNITWFKPPPPSPAPTIATSPTKAPQRRAPTTTLSSTSDRGRHSNLLLILGIVIGVLFISIVCVLILCLCTMRPKTKTPPTETEKPRTESAVPAVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELADLRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITESHDPVLPSSNTRPNLRQSSTTYESDGTSSMFSSGPYSGLSTFDYDNISRTAVFSEDLHEGR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02163 694 FunFam Receptor-like serine/threonine-protein kinase ALE2 428 643 - -
Pumo3g02163 694 MobiDBLite consensus disorder prediction 634 664 - -
Pumo3g02163 694 MobiDBLite consensus disorder prediction 250 270 - -
Pumo3g02163 694 Pfam Protein tyrosine and serine/threonine kinase 354 625 IPR001245 GO:0004672|GO:0006468
Pumo3g02163 694 FunFam Receptor-like serine/threonine-protein kinase ALE2 330 427 - -
Pumo3g02163 694 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Pumo3g02163 694 PANTHER OS01G0750732 PROTEIN 119 645 - -
Pumo3g02163 694 MobiDBLite consensus disorder prediction 307 326 - -
Pumo3g02163 694 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Pumo3g02163 694 MobiDBLite consensus disorder prediction 243 270 - -
Pumo3g02163 694 CDD STKc_IRAK 356 626 - -
Pumo3g02163 694 ProSiteProfiles Protein kinase domain profile. 350 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02163 694 SUPERFAMILY Protein kinase-like (PK-like) 326 627 IPR011009 -
Pumo3g02163 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pumo3g02163 694 Gene3D Phosphorylase Kinase; domain 1 315 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02163 Pumo-Chr3 33396883 33402197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02163 18 694 Receptor kinase-like Gene Family AT4G02010 67.188 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pumo3g02163 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02163 - - gmx:100792818 1260.74