Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02145 ATGGTTCCCAAATCCCATTCTCGAGTCATTATTCTATTTCTTCTTTCATCGATATACATTACTTTCTGTTCGGACACACATACAAGGGCAGATTTTGACAAGTGGGTATCTTGGAACGTCAAGAATCATTATCAAAAAAAGAGCATTTTGAAAGCCAAATGGAAGGTCGCTGCACCAGCTGGTCCAGATTTGAAGCTGAGGCAGGCTGAGAGTAACAAAGTTAGAATAACAGTTAGCCAAGACGGTGCTGGTGACTTCAAGACAATTACAGAAGCTATTAATAGCATTCCACCACGCAACACTAGGAGAGTTATAGTGTCCATCGCACCGGGTGTTTATAGGGAGAAGGTCATGATCCCCAGAACACTGCCCTTTATTACATTGCTAGGGGACGCCTGGGATCCACCAACCATTACTGGAAATGATACAGCATCTATCTCCGGAAGAACGTTCCAGAGTGCAACTGTTGGTGTGGATGCTAGCTATTTTGTCGCTATCAAAATAAAATTTGAGAACACTGCTCCGCATGTGATTGGAAGGAGGGGGGAACAAGCCGTGGCGCTTCGCATCTCAGGAACCAAAGCTGCTTTTTACAACTGCACTTTCTATGGGGCTCAAGACACTCTATATGATCACAAAGGCCTTCATTACTTCAACAACTGCTCTATTCAAGGTTCTGTTGATTTCATCTTCGGTTCCGGCAGGTCCCTTTACGAGAATTGCTATCTAAATTCGACAACGAAGAAGGTGGCTTCGATCACTGCTCAAAAGCGTACAAATTCGTCATTGGAGAGTGGATTCTCATTCAGAAACTGCACAGTAACAGGTAGTGGACAGATTTATCTTGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAACGTAGTTCTCGCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACTCGAGAGTATATTATGGAGAATACAAGTGTAGTGGGCCAGGGGCTAACTTGGCTGGAAGAGTGCCATGGGCACGGGTGCTTACTGATGAAGAGGCCAAGCCTTTTATTGGAATCCAATTCATTGAAGGGGACACTTGGCTTATTAGCCCCTAA 1104 0.4466 MVPKSHSRVIILFLLSSIYITFCSDTHTRADFDKWVSWNVKNHYQKKSILKAKWKVAAPAGPDLKLRQAESNKVRITVSQDGAGDFKTITEAINSIPPRNTRRVIVSIAPGVYREKVMIPRTLPFITLLGDAWDPPTITGNDTASISGRTFQSATVGVDASYFVAIKIKFENTAPHVIGRRGEQAVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCSIQGSVDFIFGSGRSLYENCYLNSTTKKVASITAQKRTNSSLESGFSFRNCTVTGSGQIYLGRAWGDYSRVVFSYTYMDNVVLAKGWSDWGDQKRDSRVYYGEYKCSGPGANLAGRVPWARVLTDEEAKPFIGIQFIEGDTWLISP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02145 367 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 364 - -
Pumo3g02145 367 Pfam Pectinesterase 76 361 IPR000070 GO:0030599|GO:0042545
Pumo3g02145 367 ProSitePatterns Pectinesterase signature 2. 223 232 IPR033131 -
Pumo3g02145 367 Gene3D - 70 366 IPR012334 -
Pumo3g02145 367 FunFam Pectinesterase 71 366 - -
Pumo3g02145 367 SUPERFAMILY Pectin lyase-like 74 364 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02145 Pumo-Chr3 33182164 33187751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02145 76 364 Carbohydrate Esterase AT5G47500 48.148 1.17e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02145 K01051 - pop:7455411 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02145 3 33182164 33187751 Pumo3g02145 3 33182164 33187751 ECH
Pumo5g03107 5 79831692 79835155 Pumo3g02145 3 33182164 33187751 PCT