Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02130 ATGGCAACAGAGACATTTCTATTCACCTCTGAATCTGTCAATGAGGGACACCCCGACAAGCTGTGCGACCAGATCTCTGATGCAGTGCTTGATGCTTGCCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACATGCACCAAGACTAACATGGTCATGGTCTTTGGAGAGATTACAACGAAGGCCAATGTAGACTACGAGAAGATTGTCCGCAACACGTGCCGCAACATTGGATTTGTCTCTGATGATGTTGGTCTTGATGCAGACAAATGCAAGGTGTTGGTCAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTGCATGGCCACTTCACCAAGCGCCCAGAAGAAGTTGGTGCTGGTGACCAGGGTCACATGTTTGGATATGCCACTGATGAAACCCCTGAATACATGCCATTGAGCCATGTCCTTGCAACCAAACTAGGAGCTCGCCTCACCGAGGTTAGGAAGAATGGAACCTGTGCATGGTTGAGACCAGATGGTAAGACACAAGTGACAGTTGAGTACTACAATGAGAATGGTGCCATGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCCACTCAGCATGATGAGACTGTCACTAATGAACAAATTGCTGCGGATCTTAAGGAGCATGTTATCAAGCCTGTCATTCCTGAGAAGTACTTGGATGACAAGACCATCTTCCACCTTAACCCTTCTGGTAGATTTGTCATTGGTGGCCCTCATGGTGATGCTGGTCTCACTGGGAGAAAGATTATCATTGATACCTATGGTGGCTGGGGTGCACATGGAGGTGGTGCTTTCTCAGGAAAGGACCCTACTAAGGTTGATAGAAGTGGTGCCTATGTTGCAAGGCAGGCAGCAAAGAGTATTGTTGCAAGTGGACTTGCACGCAGGTGCATTGTTCAAGTGTCTTATGCCATTGGTGTTCCTGAGCCTTTGTCTGTGTTTATTGACACTTATGGAACTGGAAAGATTCCTGACAAGGAGATTCTTCAACTTGTGAAGGAAAATTTTGACTTTAGGCCTGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCCATAGGTTCCTCAAGACAGCTGCCTATGGACACTTTGGAAGGGAGGACCCTGACTTCACCTGGGAAGTTGTGAAGCCACTCAAGTGGGAGAAGCCTCAAGCTTAA 1185 0.4785 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRNTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFIDTYGTGKIPDKEILQLVKENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGREDPDFTWEVVKPLKWEKPQA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02130 394 FunFam S-adenosylmethionine synthase 264 382 - -
Pumo3g02130 394 FunFam S-adenosylmethionine synthase 139 243 - -
Pumo3g02130 394 NCBIfam methionine adenosyltransferase 7 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pumo3g02130 394 SUPERFAMILY S-adenosylmethionine synthetase 242 391 IPR022636 GO:0004478|GO:0006556
Pumo3g02130 394 FunFam S-adenosylmethionine synthase 119 138 - -
Pumo3g02130 394 CDD S-AdoMet_synt 7 385 - -
Pumo3g02130 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 6 103 IPR022628 GO:0004478|GO:0006556
Pumo3g02130 394 Gene3D - 119 382 - -
Pumo3g02130 394 SUPERFAMILY S-adenosylmethionine synthetase 117 241 IPR022636 GO:0004478|GO:0006556
Pumo3g02130 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pumo3g02130 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pumo3g02130 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 121 131 IPR022631 GO:0004478|GO:0006556
Pumo3g02130 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 242 382 IPR022630 GO:0004478|GO:0006556
Pumo3g02130 394 Hamap S-adenosylmethionine synthase [metK]. 4 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Pumo3g02130 394 FunFam S-adenosylmethionine synthetase 1 13 118 - -
Pumo3g02130 394 SUPERFAMILY S-adenosylmethionine synthetase 5 111 IPR022636 GO:0004478|GO:0006556
Pumo3g02130 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 268 276 IPR022631 GO:0004478|GO:0006556
Pumo3g02130 394 Gene3D - 13 281 - -
Pumo3g02130 394 Pfam S-adenosylmethionine synthetase, central domain 119 240 IPR022629 GO:0004478|GO:0006556
Pumo3g02130 394 Gene3D - 6 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02130 Pumo-Chr3 33012078 33014767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02130 K00789 - gmx:100777770 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03574 5 85171983 85174455 Pumo3g02130 3 33012078 33014767 ECH
Pumo3g02130 3 33012078 33014767 Pumo3g02130 3 33012078 33014767 ECH
Pumo3g02130 3 33012078 33014767 Pumo5g03512 5 84352302 84355534 PCT