Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02127 ATGATGAAAGGAAAAATACTTGTCTCTGGTGTTTCCCTCATCCTTGTGGTGGGGGTTGCCATCGGTGTTGTGGTTGTTGTTAATAAAAAGGACACATCTGATCCTCAAGTAGCATCTCAACAAAAATCTGTGAAGGCAATGTGCGAAGGCACCGAAGATCTTAAGCTTTGTCACGAAACTCTTAGCACTGTGAAAAGCGACAATGCCTCAGACCCAAAGGCATACATAGCCGCTGGGGTGGAAGCAACGGTGAAAAGCGTGATCCAAGCGTTGAACATGAGTGATAGGCTCAAAGTGGAGCATGGAGACAAAGACCCTGGCATCAAAATGGCCCTTGATGACTGCAAGGACTTAATCGAATTCGCCATGGACAGCATCGAGTCCTCGGTTAATTTGGTTCGTGACCACAACATTCAAGCGTTGCATGACCAATCTCCTGACTTCAGGAACTGGCTGAGTGCAATCATCGCGTACCAGCAATCGTGCATGGACGGGTTCAACAATGACACAAACGGTGAGGACAAGATTAAGGAACAGTTGCACACGGAAAGTTTGGACCAAATGGGGAAGCTCACTGGCATAGTCCTTGACATTGTCACTAACTTAGCCAAAATCCTTGAGAGTTTTGACCTGAAGCTGGATTTGAACCCGGCCTCTCGTCGTCTTCTGGAGGTTGACGCTGAAGGATTTCCTACGTGGTTCTCTGCTGCAGATCGCAGGCTCCTTGGTAAGATGAACCAAGGAGGTGCACCCCCACCAAACGCAGTGGTTGCCCTAGATGGTAGTGGTCAATTTAAAAGCGTTAAGGAAGCTATTGACTCCTACCCTAAGGGCTTCAAAGGCAGATTCATTATTTATGTTAAGGCTGGGGTCTATAACGAGTATATCACCATTCCTAAGAAGTCAGAGAATATTCTCTTGTATGGTGATGGACCTACAAAGAGCATTATTACTGGTAGCAAAAACTTTGTAGATGGCGTCAAGACAATGCAAACGGCCACCTTTGCCAATACTGCACCTGGATTCATTGCAAAGTCAATTGCATTCGAGAACACCGCTGGCGCAAAGAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCGGCCATGTTCGACTGTGCGATGCACGGTTACCAAGACACATTGTACGTCCACGCGAACCGTCAGTTCTACCGAAACTGCGAGATCTCAGGCACCATAGACTTCATCTTCGGAGCAAGTGCAACTCTGATACAGAACTCGAGGATCATAGTAAGGATGCCAGACCCTAACCAGTTCAACACAGTGACCGCAGACGGAACCAAGCAGAAGAACATGGCCACGGGAATTGTGCTCCAGAACTGCGAGATAGTGCCGGAGAAGGCTCTGTTCCCTCAAAGGTTTCAGGTGAAATCGTACTTGGGGAGGCCGTGGAAGGAGTTCGCGAGAACAGTGGTCATGGAATCCAACATTGGTGACTTTATTCAGCCAGAAGGGTGGACTCCTTGGGATGGGAACCTGTACCTTGACACGTTGTACTATGCTGAGTATGCTAACGTTGGACCTGGCTCTAACGTTCAGGGAAGGGTGAAGTGGAAGGGTTACCATCCCAATATTAATAAGAATGAAGCTGCGCAATTCACTGCTGGCCAGTTCCTCAGAGGTGGACCTTCTGGCAATGCTGATGATTGGTTGAAGGCTACTGGCGTTCCTTATACTATTGGTTTCATCAAACCTTGA 1725 0.48 MMKGKILVSGVSLILVVGVAIGVVVVVNKKDTSDPQVASQQKSVKAMCEGTEDLKLCHETLSTVKSDNASDPKAYIAAGVEATVKSVIQALNMSDRLKVEHGDKDPGIKMALDDCKDLIEFAMDSIESSVNLVRDHNIQALHDQSPDFRNWLSAIIAYQQSCMDGFNNDTNGEDKIKEQLHTESLDQMGKLTGIVLDIVTNLAKILESFDLKLDLNPASRRLLEVDAEGFPTWFSAADRRLLGKMNQGGAPPPNAVVALDGSGQFKSVKEAIDSYPKGFKGRFIIYVKAGVYNEYITIPKKSENILLYGDGPTKSIITGSKNFVDGVKTMQTATFANTAPGFIAKSIAFENTAGAKKHQAVAFRNQGDMSAMFDCAMHGYQDTLYVHANRQFYRNCEISGTIDFIFGASATLIQNSRIIVRMPDPNQFNTVTADGTKQKNMATGIVLQNCEIVPEKALFPQRFQVKSYLGRPWKEFARTVVMESNIGDFIQPEGWTPWDGNLYLDTLYYAEYANVGPGSNVQGRVKWKGYHPNINKNEAAQFTAGQFLRGGPSGNADDWLKATGVPYTIGFIKP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02127 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 204 IPR035513 -
Pumo3g02127 574 PANTHER PECTINESTERASE 19 561 - -
Pumo3g02127 574 Gene3D - 251 571 IPR012334 -
Pumo3g02127 574 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Pumo3g02127 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 202 IPR035513 -
Pumo3g02127 574 FunFam Pectinesterase 40 203 - -
Pumo3g02127 574 SMART PMEI_2 39 198 IPR006501 GO:0004857
Pumo3g02127 574 NCBIfam pectinesterase inhibitor domain 20 202 IPR006501 GO:0004857
Pumo3g02127 574 CDD PMEI-like_3 46 204 - -
Pumo3g02127 574 SUPERFAMILY Pectin lyase-like 250 570 IPR011050 -
Pumo3g02127 574 FunFam Pectinesterase 249 571 - -
Pumo3g02127 574 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Pumo3g02127 574 Pfam Plant invertase/pectin methylesterase inhibitor 43 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02127 Pumo-Chr3 32975181 32977199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02127 6 572 Carbohydrate Esterase AT3G05610 40.280 5.74e-141 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02127 K01051 - gmx:100789650 1041.95