Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02125 ATGAACGGCAAAATAATAGGTTCGGCGGTTTCTCTCATCCTAGTGGTGGGTGTCGTAATCGGCGTGGTAGCCGTAGTTCAAAGCCCAAAAGGCATGAACAACAACAATGGAGGAGAACTGAAAACCACGAACAGGGCCGTGACAGCGTTGTGCCAAAACTCCGACGACCAGAAACTCTGCCACGACGTGCTGTCCTCTTCGAACAGCACAGACCCAAAGGACTACATTGCCACCGTGGTGAAAACCTCGATGGACAGTGTCATAAAAGCGTTCAACATGAGCGACAGGCTCACGGTGGAACACGGAAACAGCAGCGAGGGAATGAAGATGGCTCTCGAGGATTGCAAGGACTTGTTGCAGTCCGCCATCCACGAACTGGAGGCCTCAGGCGTGTTGGTTAAGGAGAGCAGCCTCGAGGACGTGAACCAGCGCGCCGCCGAGCTCAAGAACTGGCTCGGCGCCGTTGTCGCCTACCAGCAATCGTGCCTCGACGGCTTCAACACGGACGGCGAGAAGAAGGTGCAGGAACAGCTGCAGTCAGGGAGCTTGGACAACGTTGGAAAGCTCACCGGCTTGGCACTCGATGTCGTGTCGGGGATTTCGCACATTCTCCAGTCCTTGGACTTAAACTTGGCTCTCAAACCCGCCTCTCGCCGCCTCCTCGAGGTGGATCAGGAGGGGTACCCCACTTGGGTCTCCGCTGCTGATCGCAAGCTCTTGGCTCAGCTCGATAACGGTGGTGGAATTGTGCCCCATGCTACAGTGGCTAAGGATGGCAGTGGCCAATTTAATACCATTATGGACGCTATTAACTCCTACCCCAAGAAACACCAAGGTAGATACATCATCTATGTCAAGGCTGGTGTCTATGACGAGTACATTCTCGTTGACAAGAAGAAGGTGAATCTTCTCATGTACGGTGATGGCCCCACAAAGACCATCATCACCGGCCGCAAGAACTTCGCCGAGGGTACCAAGACAATGAGAACCGCCACCTTCTCTACTGTTGCTGATGATTTCATGGCCAAGTCCATTGCATTCGAGAACACCGCTGGTGCAGAAGGACACCAAGCAGTGGCACTCCGCGTGCAAGGTGATCGTTCAGTATTCTTCGATTGTGCATTGCGTGGTTACCAAGACACATTGTACGCCCACGCCCACCGTCAGTTCTACCGCAACTGCGAAATCTCTGGAACAATCGACTTCATCTTCGGTTACTCCACCACCTTGGTCCAGAACTCAAAGATCTTCGTGAGGAAGCCCATGTCAAACCAGCAGAACATAGTAGTGGCAGACGGCACCGGCCAGAAGAACATGCCCACAGGAATAGTCCTCCACAACTGCGAGATCATGCCCGACCCTACCCTCTTTCCTGACCGCTTGACCGTGAAGACCTACTTGGCCAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATCGAGAACAACATCGGTGACTTGATCCAGCCAGATGGATATATTCCATGGAACCCAATTGAACCAAACACACAGGATTGTTACTTCGCTGAGTTTGGCAACAGTGGACCCGGTTCAGCTGCACAAGCAAGGGCTAAGTTTGCCAAAGGTCTCATTAGCAAGGAGGAGGCTACACAGTTCACTGCTGAACCCTGGCTCCAAGCTAGCACCTGGTTGCCTGCCGCTGGCGTTCCTTTCGATCCTACCTTCACCAAAGCTTAA 1698 0.5324 MNGKIIGSAVSLILVVGVVIGVVAVVQSPKGMNNNNGGELKTTNRAVTALCQNSDDQKLCHDVLSSSNSTDPKDYIATVVKTSMDSVIKAFNMSDRLTVEHGNSSEGMKMALEDCKDLLQSAIHELEASGVLVKESSLEDVNQRAAELKNWLGAVVAYQQSCLDGFNTDGEKKVQEQLQSGSLDNVGKLTGLALDVVSGISHILQSLDLNLALKPASRRLLEVDQEGYPTWVSAADRKLLAQLDNGGGIVPHATVAKDGSGQFNTIMDAINSYPKKHQGRYIIYVKAGVYDEYILVDKKKVNLLMYGDGPTKTIITGRKNFAEGTKTMRTATFSTVADDFMAKSIAFENTAGAEGHQAVALRVQGDRSVFFDCALRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYSTTLVQNSKIFVRKPMSNQQNIVVADGTGQKNMPTGIVLHNCEIMPDPTLFPDRLTVKTYLARPWKAFSRAVFIENNIGDLIQPDGYIPWNPIEPNTQDCYFAEFGNSGPGSAAQARAKFAKGLISKEEATQFTAEPWLQASTWLPAAGVPFDPTFTKA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02125 565 FunFam Pectinesterase 43 201 - -
Pumo3g02125 565 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Pumo3g02125 565 FunFam Pectinesterase 247 562 - -
Pumo3g02125 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 198 IPR035513 -
Pumo3g02125 565 SUPERFAMILY Pectin lyase-like 253 560 IPR011050 -
Pumo3g02125 565 PANTHER PECTINESTERASE 19 552 - -
Pumo3g02125 565 SMART PMEI_2 42 196 IPR006501 GO:0004857
Pumo3g02125 565 CDD PMEI-like_3 49 201 - -
Pumo3g02125 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 201 IPR035513 -
Pumo3g02125 565 Pfam Plant invertase/pectin methylesterase inhibitor 46 195 IPR006501 GO:0004857
Pumo3g02125 565 Pfam Pectinesterase 253 547 IPR000070 GO:0030599|GO:0042545
Pumo3g02125 565 Gene3D - 247 562 IPR012334 -
Pumo3g02125 565 NCBIfam pectinesterase inhibitor domain 33 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02125 Pumo-Chr3 32962978 32964759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02125 3 557 Carbohydrate Esterase AT3G62170 39.898 2.58e-134 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02125 K01051 - gmx:100808559 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02125 3 32962978 32964759 Pumo3g02125 3 32962978 32964759 ECH