Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02121 ATGGGTGTGGAGAATGGCGAAGAGAGAAAACATGATGACGCAAGCACGTCAGAGAATCGTGCAGAAACCAGCACGAATGGGGAAAAGGAAGAAAAGAGCAAACAAGAGACAGTTCCATTCCACAAGCTGTTCGCTTTTGCAGACTCCACTGACATTCTGTTGATGGCTGTTGGGACCATTGGTGCCATTGGGAATGGTCTGGGTTTGCCTCTCATGACTTTGCTCTTCGGTGAAATGATTGATAGCTTCGGTAGTAACCAGCGAAACACTAACGTGGTCGAAGAAGTATCCAAGGTTTCTCTTAAATTTGTGTACTTGGCAGTAGGATCTGGGATGGCAGCGTTTCTCCAGGTGACTAGTTGGATGGTCACGGGGGAGAGACAGGCTGCACGGATAAGGGGATTGTATTTGAAAACTATTCTGAGACAAGATGTTGCTTTCTTTGATAAGGAAACAAACACGGGAGAGGTCATAGGGAGGATGTCAGGGGATACGGTTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGATTTGTGATAGCATTTGTCAAAGGGTGGCTTCTTACTGTTGTCATGTTGTCCACCCTTCCACTTCTTGTTTTGTCAGGTGCTGCTATGGCTGTCATCATAGGCAGGATGGCTTCTCGAGGTCAAACAGCTTATGCAAAAGCTGCACATGTGGTTGAACAGACAATTGGCTCAATGAGAACCGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTATCAAGTTATAGCAAATTTCTTGTAGATGCTTACAAATCAGGAGTTCATGAAGGTTCCATAGCTGGAGCGGGTCTAGGCACAGTTATGTTTGTAATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAGGGATATAATGGGGGCACGGTGATCAATGTGATTATTGCCGTGCTAACTGCTTCAATGTCTCTTGGACAGGCATCCCCCAGCATGAGTGCTTTTGCTGCAGGTCAGGCTGCAGCTTACAAAATGTTTCAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATACTAGAAGATATTCAAGGCGAAATAGAGTTAAGGGATGTTTATTTCAGTTATCCAGCAAGACCTGAGGAGTTGATATTTAATGGATTCTCTCTTCATATACCTAGTGGTACAACTGCGGCTTTAGTTGGACAAAGTGGAAGTGGAAAGTCCACGGTTATCAGCTTGGTAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGCATTAACCTGAAAGAATTTCAGCTTAGGTGGATCAGAGGAAAAATTGGTCTTGTCAGCCAGGAGCCAGTTTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGAGGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAGCTTCCACAGGGATTGAACACAATGGTTGGTGAGCATGGAACTCAACTGTCTGGTGGGCAGAAGCAACGCATTGCCATTGCAAGAGCAATCCTGAAAAATCCGAGAATTCTACTTCTAGATGAAGCCACAAGTGCACTTGACGCAGAATCTGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCAACAGAACTACTGTTGTAGTGGCACATCGCTTGAGTACAGTGAGGAATGCTGATATGATTGCTGTCATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACTCAGAATTACTCAAGGATCCTGAGGGAGCATACTCTCAACTTATACGCTTACAAGAAGTAAACAAGGAGACAGAAGAAAATGCTGACCATCACGACAAGAGTGAACTTTCTATAGAATCCTTTAGACAATCCAGTCAGAGGAGATCACTTCAAAGATCTATTAGTAGGGGGTCATCCTTAGGGAATAGTAGCCGCCACTCATTTTCAGTTTCCTTTGGTTTACCCACAGGAGTTAACGTCCCTGATCCTGAACTTGAAAACTCACAACCCAAAGAAGAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGGGTTATACTTCCAATATTTGGCGTGCTGATTTCCAGTGTCATCAAGACATTTTACGAACCATTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCACTGATGTTTATGGTCCTTGGTCTTGCATCATTTCTGATCATTCCTGCACGAGGATACTTTTTTTCCGTGGCAGGATGTAAGTTAATCCAACGTATCAGGCTAATGTGTTTTGAGAAGGTTGTCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAAAACTCTAGTGGTGCCATTGGTGCAAGGCTCTCAGCAGATGCTGCTTCTGTGCGTGCCCTTGTTGGTGATGCGCTGGGACTATTGGTTCAAAATTTAGCATCTGCACTGGCAGGTTTGATTATTGCTTTTGTTGCATCTTGGCAGCTGGCATTAATTATTCTTGTCTTGATTCCCCTGATTGGAGTAAATGGATATGTTCAAATGAAATTCATGAAGGGATTTAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGACAAGGTCATGGAACTATACAGGAAGAAATGTGAGGGCCCCATGAAAACAGGGATACGGCAAGGGATGATCAGCGGATCAGGATTTGGAGTTTCATTTTTCTTACTGTTTTGTGTTTATGCAACCAGTTTCTACGCAGGAGCTAGACTTGTGGACGCTGGGAAGACAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCAGCTATTGGAGTTTCCCAATCAAGCTCTTTTGCTCCTGACTCAAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATTATTGATATGAAGTCGAAGATAGATCCCAGTGATGAGTCTGGTAGCACACTGGATAGCGTTAAGGGAGAAATTGAGCTTCGTCACGTGAGCTTCAAGTATCCTTCTAGGCCTGATATACAGATTTTCCGAGACCTCAGCTTGGCCATCCATTCTGGCAAGACGGTGGCTCTTGTTGGTGAAAGTGGAAGTGGTAAATCCACAGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGGCAAATCACACTTGATGGGATAGAAATTCGGCAGTTACAGCTCAAGTGGTTAAGGCAGCAGATGGGTCTTGTAAGCCAAGAGCCAGTTTTGTTCAATGAAACTATACGTGCCAATATTGCCTATGGAAAAGGAGGTGATGCTACTGAAGCAGAAATCATAGCTGCAGCAGAATTGGCCAATGCTCATAAATTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGGCAGAAGCAACGGGTAGCAATTGCTCGTGCCATAATTAAAAGTCCAAAGATATTGCTACTAGATGAGGCTACAAGTGCATTAGACGCTGAGTCAGAAAGAGTTGTTCAAGATGCATTGGACAAAGTCATGGTGAACAGGACCACTGTGGTTGTGGCACATCGTCTATCTACAATAAAAAACGCAGATGTGATTGCTGTTGTGAAAAATGGAGTTATAGTGGAGAAAGGGAAGCATGAAACGCTCATTAACGTCAGTGGTGGATTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTTCAACAGTATGA 3837 0.436 MGVENGEERKHDDASTSENRAETSTNGEKEEKSKQETVPFHKLFAFADSTDILLMAVGTIGAIGNGLGLPLMTLLFGEMIDSFGSNQRNTNVVEEVSKVSLKFVYLAVGSGMAAFLQVTSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVKGWLLTVVMLSTLPLLVLSGAAMAVIIGRMASRGQTAYAKAAHVVEQTIGSMRTVASFTGEKQAVSSYSKFLVDAYKSGVHEGSIAGAGLGTVMFVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLNTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKETEENADHHDKSELSIESFRQSSQRRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVPDPELENSQPKEEAPEVPLSRLASLNKPEIPVLLIGCVAAIANGVILPIFGVLISSVIKTFYEPFDEMKKDSKFWALMFMVLGLASFLIIPARGYFFSVAGCKLIQRIRLMCFEKVVNMEVGWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGMISGSGFGVSFFLLFCVYATSFYAGARLVDAGKTTFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDMKSKIDPSDESGSTLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIRQLQLKWLRQQMGLVSQEPVLFNETIRANIAYGKGGDATEAEIIAAAELANAHKFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINVSGGFYASLVQLHTSASTV 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02121 1278 MobiDBLite consensus disorder prediction 620 636 - -
Pumo3g02121 1278 Pfam ABC transporter 1052 1201 IPR003439 GO:0005524
Pumo3g02121 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 56 343 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02121 1278 Pfam ABC transporter transmembrane region 711 983 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02121 1278 Pfam ABC transporter transmembrane region 56 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02121 1278 Pfam ABC transporter 397 545 IPR003439 GO:0005524
Pumo3g02121 1278 SMART AAA_5 405 591 IPR003593 GO:0016887
Pumo3g02121 1278 SMART AAA_5 1060 1253 IPR003593 GO:0016887
Pumo3g02121 1278 Gene3D - 376 633 IPR027417 -
Pumo3g02121 1278 FunFam ABC transporter B family member 9 42 374 - -
Pumo3g02121 1278 ProSitePatterns ABC transporters family signature. 1173 1187 IPR017871 GO:0005524|GO:0016887
Pumo3g02121 1278 SUPERFAMILY ABC transporter transmembrane region 699 1017 IPR036640 GO:0005524|GO:0016020
Pumo3g02121 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1024 1270 IPR027417 -
Pumo3g02121 1278 Gene3D ABC transporter type 1, transmembrane domain 101 1007 IPR036640 GO:0005524|GO:0016020
Pumo3g02121 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 378 614 IPR003439 GO:0005524
Pumo3g02121 1278 Gene3D - 1023 1277 IPR027417 -
Pumo3g02121 1278 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 712 998 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo3g02121 1278 FunFam ABC transporter B family member 1 1023 1273 - -
Pumo3g02121 1278 FunFam ABC transporter B family member 9 1000 1022 - -
Pumo3g02121 1278 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1033 1270 IPR003439 GO:0005524
Pumo3g02121 1278 CDD ABC_MTABC3_MDL1_MDL2 1033 1271 - -
Pumo3g02121 1278 ProSitePatterns ABC transporters family signature. 517 531 IPR017871 GO:0005524|GO:0016887
Pumo3g02121 1278 FunFam ABC transporter B family member 1 368 617 - -
Pumo3g02121 1278 FunFam ABC transporter B family member 1 691 999 - -
Pumo3g02121 1278 CDD ABC_MTABC3_MDL1_MDL2 378 616 - -
Pumo3g02121 1278 CDD ABC_6TM_Pgp_ABCB1_D2_like 701 1016 - -
Pumo3g02121 1278 CDD ABC_6TM_Pgp_ABCB1_D1_like 55 339 - -
Pumo3g02121 1278 MobiDBLite consensus disorder prediction 637 665 - -
Pumo3g02121 1278 MobiDBLite consensus disorder prediction 620 665 - -
Pumo3g02121 1278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 616 IPR027417 -
Pumo3g02121 1278 PANTHER ABC TRANSPORTER B FAMILY 16 618 IPR039421 -
Pumo3g02121 1278 MobiDBLite consensus disorder prediction 1 35 - -
Pumo3g02121 1278 SUPERFAMILY ABC transporter transmembrane region 41 362 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02121 Pumo-Chr3 32897791 32904140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02121 28 1277 Calmodulin-binding Proteins AT2G36910 45.375 0.0 1077