Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02104 ATGACAATGAAGCTGCTTTTGTTAGCCGTTGAAGTTGCATGCTTAGTTTCTGGGATCTTGTCCTTTGGATCTGAGACACTGTCTGAGCTTTCTTTCTTAGAAAACGATGTCGTCTCAACAAGGCTTTCCTCCTCTTCATCTCAACCTCAACCTCAACCTCTTATGGTGGACCTCACTCTCATTCAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGATACCATTTGGATCGTGGATTTGGATCTGGTGCAGAAAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGCAATACCATCAGAAACTGTGTCTATAGAAAAAATACTCATCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAATTACGGTACTGTGATGGGGCGTCTTTCAGTGGAGATAGTGAAGATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATGGAGGACTTAATGTCCAAAGGAATGCAGAAAGCCAACCAGGCACTTCTCTCTGGATGCTCTGCTGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCAGGAGATTGTTTCCAAAATCTTCCAAAGTGAAATGTTTGAGTGATGGAGGTTTTTTTCTTGATGCAATGGATGTATCTGGGGGACGCACACTGAGGAATCTTTTTGGAGGTGTGGTTCAGATACAGGAGGTACAAAAAAATCTGCCAAAAAGTTGTCTCGACCAACGAGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATTGATCATGTTGAGACCCCATTGTTTCTACTCAACGCTGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCGCCTTGGTTCTTGGAATGAATGCAAATCAAACCATGCAAATTGTAGCTCGTCTCAAATGCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTGAAGACTTCTCAAGGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCCGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCATACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1266 0.4305 MTMKLLLLAVEVACLVSGILSFGSETLSELSFLENDVVSTRLSSSSSQPQPQPLMVDLTLIQGADSKGAVCLDGTLPGYHLDRGFGSGAESWLIHLEGGGWCNTIRNCVYRKNTHRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSEDESAQLQFRGQKIWLAAMEDLMSKGMQKANQALLSGCSAGGLASIIHCDEFRRLFPKSSKVKCLSDGGFFLDAMDVSGGRTLRNLFGGVVQIQEVQKNLPKSCLDQRDPTSCFFPQNMIDHVETPLFLLNAAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQMQFLQDFRNQMLSDIEDFSRSSQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02104 421 PANTHER NOTUM-RELATED 35 415 IPR004963 GO:0016787
Pumo3g02104 421 Pfam Pectinacetylesterase 51 399 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02104 Pumo-Chr3 32722460 32727023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02104 3 420 Carbohydrate Esterase AT3G62060 63.341 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02104 K19882 - gmx:100786972 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03561 5 85003808 85008458 Pumo3g02104 3 32722460 32727023 ECH
Pumo3g02104 3 32722460 32727023 Pumo5g03561 5 85003808 85008458 ECH
Pumo3g02104 3 32722460 32727023 Pumo3g02104 3 32722460 32727023 ECH
Pumo4g00559 4 7381218 7387225 Pumo3g02104 3 32722460 32727023 ECH
Pumo5g03537 5 84661447 84668643 Pumo3g02104 3 32722460 32727023 PCT