Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02081 ATGGGGAACCTCTTCTGGCTTGGCATTGTTGCAGCACTTGTTTTTGGCTTCTGGGTTGATGCCTTTTCAGCCTATCAATATCACCACTTCAATGAAACCGAGTTCTCTTTATTGGAGTCTCAAGAACAAGCTTCCTCCTCCCTCTTTGGGAGGACTCCTCTCATGGTTGGACTCACCCTTATTCAAAGTGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACTGATACCCTTTACTGGAATATTAAGCAATAATGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGATGGTGAAGATAAGGCTGCGCAACTGCAATTTAGAGGACAGCGTATTTGGTTGGCTGCAATTGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTCTGGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCACAGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGATTATTTCTTGATGCGATTGATGTGTCCAGGGGACATAGCATCAGGAATTTTTTCGGTGGTGTCGTAAGGCTACAGGGAGTGCAAAAGAATCTGCCACGCATTTGTACTAATCACCTTGATCCCACTTCGTGTTTCTTTCCTCAGAATTTGATTGCCGGTATTAGAACCCCGCTATTCATTCTTAATACTGCCTATGACTCATGGCAGATCCAATCAAGCTTAGCTCCTTCATCAGCAGATCCCCATGGCTTTTGGCATGATTGTAGATTAAATCATGCTAAATGTAGTACTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTGAATGCTATTAAAGGCTTCTCAAGATCACGTCAGAATGGATTGTTCATAAATTCGTGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTTGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAGGGCCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATCTTGTCTTTAGATGA 1260 0.4317 MGNLFWLGIVAALVFGFWVDAFSAYQYHHFNETEFSLLESQEQASSSLFGRTPLMVGLTLIQSAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKLIPFTGILSNNAEDNPDFFNWNRVKIRYCDGASFAGDGEDKAAQLQFRGQRIWLAAIEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHSIRNFFGGVVRLQGVQKNLPRICTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQIQSSLAPSSADPHGFWHDCRLNHAKCSTSQIQYLQGFRNQMLNAIKGFSRSRQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVRAIDCPYPCDNTCHHLVFR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02081 419 Pfam Pectinacetylesterase 53 398 IPR004963 GO:0016787
Pumo3g02081 419 PANTHER NOTUM-RELATED 54 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02081 Pumo-Chr3 32518054 32523245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02081 1 419 Carbohydrate Esterase AT1G57590 67.139 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02081 K19882 - gmx:100810716 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03561 5 85003808 85008458 Pumo3g02081 3 32518054 32523245 PCT