Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02068 ATGGGCGGAGGCGGAGCGGCGACGGCGCAAGCGGAGGCGCAGTACTCGTCGGCGAAGACGTCGGTGTGGTGGGACATAGAGAACTGCCACGTGCCGAAAGGGTGCGATCCCCACGCCATCGCGCAGAACATAAGCTCTGCCCTCGTTCGCATGAACTACTGCGGCCCCGTTTCTATCTCCGCCTACGGCGACACCACTCGCATCACTGCCTCCGTCCAGCACGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGTGTTAAAGATGCAAGTGACAAAAAGATTCTTGTTGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTATTAATTTCTGGTGACCGAGACTTCTCCAATGCCCTTCATCAGTTGCGGCTGAGGAGGTATAATATTCTTCTTGCACAACCTCAGAAAGCTTCTGCACCCTTAGTTGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCTCCTCTTATGAATGGTGAATCACAACAACTTGGTAATAATAACATCCAATCATCTTCTGACACCTTACCGATTCCAGTCTCTAATGCTGTTCAGATACCACAGAACGTGAATCCCTTTTCAGAAGTTCATGCAGGAAATCAGAAATTTCCAAATACAGGAAGGCAACTTGATTCTAGACATCATGGGAAAAAGAATGGGAGAAATTCAAGTAAACCAAATGGACCCAAGGCCATGAATCCAGCTCCGGTTGGACTTCAAGAAAATTATAGCAATATAAGTTCTTCTCAAACTGGCAACTATACCCATAATGTTCCCCCAAGTGGATCTACCCCAAATTTTATTCGTGGCAATCCTGATCAAATGCGGGGCAATAATGGTAATCTACAGGGCAATCATCAAAATCCATATTCACAGCCATTAAGATCAAACTCTTTTCCTTCGCAACCTCCTTTTGTACCAAGTAATTCATTTTCTCCAAATCCCCAAACTTTTGCAACTTCAGTAGTGCCACCTAGAACTGGTGGACCCAGCCTCTCTGCAGCACCACTTACAAATGTGCCAGATATTAGCAATCTGAAAATTTCTGGATATCCTAGTAATGCTCAAGATCCACGCCCTGTTAAACAATGGAATGGAGACTTGAAACGGAGTTCTAACAGTAATGCTCCAAATCCTGTAAAGTCAATTGATGAACAAAATGGACATATGGTACAAAACACTCAACAATTGTATAACGGCCATCCACATGGTCCAGAATACCAACCTACATCATTGACAACTTTGGGTAATAATAACCTTCCTGGTAATGGTATATGGGGATCTCCAGGATGCCCTAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACGCTAAAAACTGAAAAAATTATGCCAACTGAGTCAAATATAACAGATTGCATTCGATGTGGAGATCCCAAGCACCGCAACGCAGATGTCAAGAAGGCTCTGGAGAATGCTATTGAGCAGCAGATGGTGGTGAAGCAGAATGTAGGTGCTTTGCAGTTGTTTGTTGGTAAGAATGATAGGGTTTGGAAGTGTGTAAACCCTGTAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACATGGAATGAAATTAAAAAATTCCTAACAACTCCTTCTGGTAGATTAGCCATAATGGGTACTCAGTGCAAGTAA 1701 0.4497 MGGGGAATAQAEAQYSSAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLMNGESQQLGNNNIQSSSDTLPIPVSNAVQIPQNVNPFSEVHAGNQKFPNTGRQLDSRHHGKKNGRNSSKPNGPKAMNPAPVGLQENYSNISSSQTGNYTHNVPPSGSTPNFIRGNPDQMRGNNGNLQGNHQNPYSQPLRSNSFPSQPPFVPSNSFSPNPQTFATSVVPPRTGGPSLSAAPLTNVPDISNLKISGYPSNAQDPRPVKQWNGDLKRSSNSNAPNPVKSIDEQNGHMVQNTQQLYNGHPHGPEYQPTSLTTLGNNNLPGNGIWGSPGCPKPSEYVQGLIGVVLLALNTLKTEKIMPTESNITDCIRCGDPKHRNADVKKALENAIEQQMVVKQNVGALQLFVGKNDRVWKCVNPVGGNPKKHSKETWNEIKKFLTTPSGRLAIMGTQCK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02068 566 MobiDBLite consensus disorder prediction 252 393 - -
Pumo3g02068 566 Gene3D - 11 162 - -
Pumo3g02068 566 Pfam NYN domain 19 155 IPR021139 GO:0004540
Pumo3g02068 566 CDD PIN_limkain_b1_N_like 19 143 - -
Pumo3g02068 566 MobiDBLite consensus disorder prediction 208 393 - -
Pumo3g02068 566 PANTHER LIMKAIN B LKAP 14 508 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02068 Pumo-Chr3 32215164 32219137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02068 11 181 C2H2 Transcription Factor Family AT5G61190 76.023 5.62e-84 280