Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02064 ATGGGTGACGATCTTAAAGCTGAATTGTCCGAGAAAACTCCTTTTTTTGGTCTTAAGGTTTGGGAAATAATTGGAATTGCGGTTGGATTGTTTATTATTGTCATCCTCTGTGTGCTCTCATTTTGCCTTACTTCAAGGAAGAAAACTAGAAAAGCCAGGAACAGGATTCCTGTTAGTCATATACCTACTGTCTCAAAGGAAATCACTGAAGTGCGGGTTGAGCAAGTGCCTGCGAATGGATTTGTTCCTCGTGAAGGAATACTTCTTACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAGGTTATGCTTCATTTAGGTGTTGGGAAGAAGAAGAAGCATGGGGATAGTGGCAGTCATCACTCGGATTCGTTTCATTACTCAGAGAAAGATGGAGGTGGGTCACAATCAGGGGAAGAAATTAGCTCTGGCACGGTTGGAATGTACATGCCCTCTTCTTCATACCCTATAACAGCTCCTTCACCTCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGGTGGGGTCACTGGTTTACACTGAGGGATCTTGAACTTGCTACAAACCGTTTTTCAAAAGATAATGTAATTGGTGAGGGTGGATATGGAGTTGTTTACCGGGGACAGTTGGTCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGGGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAATTTGGTTCGTCTTTTGGGGTACTGCATTGAGGGGACTCACAGGATGTTAGTCTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCACGGAGCTATGCGACATCATGGATATCTTACCTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCTAAGGGGCTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCCAGCAACATATTAATTGATGATGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTTGGTTCTGGGAAGAGTCATGTTGCAACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTTGACTATGGTCGTCCAGCACAGGAAGTTAATATGGTTGATTGGCTGAAGATGATGGTTGGAAACCGGCAATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAGGCCATCTACCAGAGCTTTGAAACGGGCGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCTGAGAAAAGACCCAAGATGGGCCAAGTTGTGCGTATGCTTGAGTCAGAGGAGTACCCTTTAGCAAGAGAGGACCGTAGGCACCGAAGAAATCGTGGGGTTAACTCAGAAATTGAATCCCATAAGGATAATTCTGACTCGGATGGCAGTGACATTCAGGGTTCTAGATCAGAAAGCGGAAGGTAA 1530 0.4346 MGDDLKAELSEKTPFFGLKVWEIIGIAVGLFIIVILCVLSFCLTSRKKTRKARNRIPVSHIPTVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKKHGDSGSHHSDSFHYSEKDGGGSQSGEEISSGTVGMYMPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKMMVGNRQSEEVVDPNIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHRRNRGVNSEIESHKDNSDSDGSDIQGSRSESGR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02064 509 CDD STKc_IRAK 197 463 - -
Pumo3g02064 509 MobiDBLite consensus disorder prediction 465 497 - -
Pumo3g02064 509 MobiDBLite consensus disorder prediction 130 146 - -
Pumo3g02064 509 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Pumo3g02064 509 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02064 509 SUPERFAMILY Protein kinase-like (PK-like) 175 470 IPR011009 -
Pumo3g02064 509 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Pumo3g02064 509 FunFam Putative receptor-like protein kinase 173 266 - -
Pumo3g02064 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Pumo3g02064 509 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02064 509 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Pumo3g02064 509 MobiDBLite consensus disorder prediction 111 146 - -
Pumo3g02064 509 MobiDBLite consensus disorder prediction 465 509 - -
Pumo3g02064 509 Gene3D Transferase(Phosphotransferase) domain 1 267 479 - -
Pumo3g02064 509 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g02064 509 PANTHER OS01G0323000 PROTEIN 5 489 - -
Pumo3g02064 509 MobiDBLite consensus disorder prediction 111 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02064 Pumo-Chr3 32155188 32159635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02064 168 465 Trihelix Transcription Factor Family AT1G70460 50.825 5.13e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo3g02064 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02064 - - gmx:100778269 924.08