Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02057 ATGGCGGGTAGTTTTATTCCACTCTTGGCCATGATTATTGTACAATTGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATACAATCTGGCATGCACCCTCTTGTCCTTGTTGCTTATCGCCAAATTTTTGCGACTATATCCCTTGCTCCCTTCGCTTATTGGTTAGAATGGAAGACGGCTCCCCGAATGACAAAGCGCATCGCGTTCCAGATATTATTATCTTCCTTAACAGGAGTAACAGGAAATCAGATTCTATACTTCGTGGGGCTTAAATATTCAACCGCTACAATTGCATGTGCACTAAACAACTTGCTCCCAGCATTCACTTTTGTTCTTGCAGTCCTCTTCAGACAAGAGAATTTGAGAATCAAGACGAAGTCCGGGGTAGCAAAAGCGTTAGGGACAGTCCTTAGTGTGGGTGGAGCCGTGCTTTTATCATTTTACCATGGAAAAGTCCTTGGCCTAGGTAAGTCAAAGATTCACTGGAGATATGCAGAAGAAATGGAAAGACAATCCTCTTCTTCTGCTGGTGGATCAAACCTTCTTCTGGGCCCTGTTGCTGTAATTGTTAGTGCTCTTGTTTGGGCTGTATGGTTCATAGTTCAAGCAAACATGAGCAAGAGCTATCCAGCTCCTTATACTAGCACTTTCTACATGTGTTTCATGGCAAGCATTCAATGTGTGGCCATTGCCTTGTCTGTTGAACACAACGCCTCAGCTTGGTCACTCCACAGTACTATAAGGCTCACCTCTGCTCTTTATGCGGGGACTATTTCTACTGGGCTAGCGTATGTGCTGCTTTCATGGACCATTGAGAGGAAAGGTCCTCTCTATGTATCTGTGTTCTCCCCTTTGCTGCTTGTGATCATTGCCGTTGCCAGCTGGGCTCTACTTCATGAGCAATTATACGTTGGAACTGCCATAGGGTCTCTGCTGATAGTGTTGGGGCTGTATTTTGTTTTGTGGGGAAAGAACAAAGAGATGAATAAGATAAACCTAGTTGAAGGCACAGTGACGGAGGCAATAAAGGAAAGCGAGAAGGATGAGGTGAAAGACCTGGAATTGCAACCTTATGATGCTGATTAA 1092 0.4441 MAGSFIPLLAMIIVQLGYAGMNITSKLAIQSGMHPLVLVAYRQIFATISLAPFAYWLEWKTAPRMTKRIAFQILLSSLTGVTGNQILYFVGLKYSTATIACALNNLLPAFTFVLAVLFRQENLRIKTKSGVAKALGTVLSVGGAVLLSFYHGKVLGLGKSKIHWRYAEEMERQSSSSAGGSNLLLGPVAVIVSALVWAVWFIVQANMSKSYPAPYTSTFYMCFMASIQCVAIALSVEHNASAWSLHSTIRLTSALYAGTISTGLAYVLLSWTIERKGPLYVSVFSPLLLVIIAVASWALLHEQLYVGTAIGSLLIVLGLYFVLWGKNKEMNKINLVEGTVTEAIKESEKDEVKDLELQPYDAD 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02057 363 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020
Pumo3g02057 363 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Pumo3g02057 363 PANTHER WAT1-RELATED PROTEIN 7 337 IPR030184 GO:0016020|GO:0022857
Pumo3g02057 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Pumo3g02057 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02057 Pumo-Chr3 32059093 32061938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02057 6 356 Nodulin-like Gene Family AT1G09380 56.695 8.42e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02057 - - gmx:100802059 641.728