Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02055 ATGGCTGGTAACGGTACCCATTCAGATTCAGAAGCAGCAGCCACCATTGTGATTAAGGATCTCAGATTTACGTACCCCGGCATCGACGGCCACCCCCCGCCGGGTTCCACTCCCCTCATTCAGGATTTCAATCTTACCCTCTGTTCTGGCCACCGCTGCCTCCTCGTCGGTTCCAACGGCGCTGGCAAGACCACTATCCTCAAGATATTAGGAGGGAAGCACTTGGTCGAACCTGACATGGTTCGCGTGCTCGGAAGATCAGCTTTTCACGACACCACTTTAGTGTCTTCCGGCCATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGAGGTTCCAATACAAATGGACGTTTCTGCTCAAAAAATGATATTTGGTGTGGCTGGGATTGATCCCCAAAGAAGAGAGGAGCTAATCAAGGTATTAGATATTGATCTTTCCTGGAGATTGCATAAAGTGTCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTTCTTGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAGATTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACTATTATCTATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACAAATATTGTTTATGTGGCCCATGGGAAGCTGCAACTAGCTATGCCTATGGACAAAGTCAAAGAAATTAGCAAATTGTCTCTAATGAGAACGGTTGAAAGTTGGCTGCGGAAAGAACGAGATGAAGATAGACAGAAAAGGAAAGAGAGAAAAGCAGCTGGTCTTCCTGAATTTGGAAAGCAAGTCGATGGAAGCCGTGTAACAGGGGATCCAGCACGTGCTGCAGTTCGAGTAATTAATAATGGTTGGGCTGCAGGACGATTAAATTCCACCGTTGCTGGCGAGGAAAACTTTCTCCTCAGCTCAAACCGAGTTTTGAGGCAGTAG 1005 0.4647 MAGNGTHSDSEAAATIVIKDLRFTYPGIDGHPPPGSTPLIQDFNLTLCSGHRCLLVGSNGAGKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGHLCYLGGEWRRDVAFAGFEVPIQMDVSAQKMIFGVAGIDPQRREELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRQKRKERKAAGLPEFGKQVDGSRVTGDPARAAVRVINNGWAAGRLNSTVAGEENFLLSSNRVLRQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02055 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 251 IPR027417 -
Pumo3g02055 334 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 14 262 - -
Pumo3g02055 334 SMART AAA_5 49 236 IPR003593 GO:0016887
Pumo3g02055 334 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 16 259 IPR003439 GO:0005524
Pumo3g02055 334 Pfam ABC transporter 41 186 IPR003439 GO:0005524
Pumo3g02055 334 Gene3D - 11 287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02055 Pumo-Chr3 32046562 32049320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02055 18 213 Calmodulin-binding Proteins AT2G36910 22.066 1.05e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02055 3 32046562 32049320 Pumo3g02055 3 32046562 32049320 ECH