Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02048 ATGTCCGAAGACAAAGACAGGGAGCACTACGGAGTACTCCTCTATTACAAGTACGCTGAAATTCCCAACCTCGACGACCTCCTCACTTTCTATCATTCCAACTGCTCCTCCCTCAGCCTCCTCGGTCGTGTTCGCCTTTCTCCTCACGGCGTCAATGTCACCGTTGGCGGCAACTTGTCCTCTCTCGAGACCCACATCGAAGCCCTCAAAGCCTACAGCACCTTGTTTCACGACACTGATTTCAAGCTCGCCTCGTGTCATCAGCCATTAAACGACAAAGTAGCCCAGGAGTGTGGATTCTCTTCTCTCTCTATTCGGATCGTCGACGAACTTGTTACTCTCTGTTCCCATCCACTGTTAAAGTCACCCCATATCTCCAATGCTGGAAAGCATCTCTCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCAACAACGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAGTTTAATGTGCCAAATGTTGAAACTCTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCCTGGATAGATGATAATGGCGAGCGGTTGAAAGGAAAAAATATCCTCATGTATTGTACTGGTGGAATCCGGTGCGAAATGGCGTCAGCGTATATTAAGTCTAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTCATTGGGACCTGCCTTATTTGTCAATGCTCATTTGATGATTACTCTTCTCGCTGCCGGTGTACTTACTGCCGAATGCTTGTCTTGGTTTGTGGTAGTTGCCAGAATGAATCTACAGAGTACGTTTGTGAGCTATGTCAGAAACAGGGCAAGGCCGTCAGGTCGACACAGTTAATTGAAAATGGTGAATCAAAAACATCATTGCCAGGTGTCGAATTCCAGAATTTTTCTTCAGATACTATATGTTTGCCTCAAGTGCCTAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTGCATGGGTTTCGACAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTCAAGAAAATGACTGAATTTGTTTTTATCGACGCTCCTCATGAATTGCCATTCATTTACCAAACCCCCATGTCCGAGCTCAATGTGAATTGTACATCATCATCATTGCCACCCAGTCCTCCTCCTCCTTTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGTAGTGATGCTGATTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCACTATCACACTTGAAGAATGTGTTTTCCCAAGAAGGGCCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATATCTGCACAACAAGAAAACCTGAAAGTTGAAATGGACTTTAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAAGAGATGGAGTGTGGCCCTATAAAGTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTAAAGACAGACAGATAGCCAACCAAGCTAGCAAGGATCTTGCTTCTCTGTATGATAGTGATTGTTCTGCGATCGTTGAGCATGATTGTGGTCATATAATTCCTACCAGGTCTCCGTACATTGATGAGATCAAGGATTTCCTTGGGCGTTTTCTGTAA 1815 0.4397 MSEDKDREHYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSPHGVNVTVGGNLSSLETHIEALKAYSTLFHDTDFKLASCHQPLNDKVAQECGFSSLSIRIVDELVTLCSHPLLKSPHISNAGKHLSALDFHSSLHNANNGLVLLDARNLYETRIGKFNVPNVETLDPQVRQYSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCTYCRMLVLVCGSCQNESTEYVCELCQKQGKAVRSTQLIENGESKTSLPGVEFQNFSSDTICLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMTEFVFIDAPHELPFIYQTPMSELNVNCTSSSLPPSPPPPLENCKKKFAWFVAPNFDGSSDADWKVADGPFDPLQYQQQTDGYDISLSHLKNVFSQEGPFDGILGFSQGAAMAALISAQQENLKVEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIANQASKDLASLYDSDCSAIVEHDCGHIIPTRSPYIDEIKDFLGRFL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02048 604 Gene3D alpha/beta hydrolase 358 604 IPR029058 -
Pumo3g02048 604 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 603 IPR020936 -
Pumo3g02048 604 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 108 258 IPR036873 -
Pumo3g02048 604 Gene3D - 121 273 IPR036873 -
Pumo3g02048 604 SMART rhod_4 134 241 IPR001763 -
Pumo3g02048 604 Pfam Rhodanase C-terminal 246 311 IPR022111 -
Pumo3g02048 604 FunFam esterase OVCA2 isoform X6 358 604 - -
Pumo3g02048 604 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Pumo3g02048 604 ProSiteProfiles Rhodanese domain profile. 144 244 IPR001763 -
Pumo3g02048 604 Pfam Serine hydrolase (FSH1) 360 595 IPR005645 -
Pumo3g02048 604 SUPERFAMILY alpha/beta-Hydrolases 363 604 IPR029058 -
Pumo3g02048 604 Gene3D - 1 112 - -
Pumo3g02048 604 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 272 - -
Pumo3g02048 604 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02048 Pumo-Chr3 31981501 31985420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02048 5 604 Sulfurtransferasese or Rhodanese AT1G09280 64.039 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02048 - - gmx:100786152 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02048 3 31981501 31985420 Pumo3g02048 3 31981501 31985420 ECH