Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02043 ATGGTTTGTAGAGCAGTGGATTGTGGTGGCACGCAAGTTTCACGAACCATCATAGTTGATCAATCTGGTAAATCAGGTTTTCGTACGATTCAAGCTGCCATTGATTCAATAAAGACAAACAACAATCAATGGGTCAAAATTCACATAGTGGCCGGTACATACAAAGAGAAGGTTCAAATTCCACAGGAAAAGCTGTGCATCTTTTTGGAAGGTCAAGGAAAACAAGTCACCACTATTACATACAATGACCACCAAAGAACAGATATTAGTGCCACATTCTCTTCATTTGCAAACAACGTTATTGCAACAGGCATTACTTTTAAGAACTCGTTCGCTATTCCGGTGAGAAGTTTTGGGGTTCGGATCCCAGCATTGGCTGCAAGGATACATGGAGACAAATCTGCCTTTATTGATTGTAGATTCATTGGTTTTCAAGATACGTTATGGGATGTGAAAGGTCGTCACTACTACAAAAATTGTCTCATTGAAGGTGCCGTAGACTTCATATTTGGCTATGGACAGTCCTATTTTGAGCACAAGGACGCGGTTCAAATAGCGACCCAGGTGGTTTTGTGTTTCAACGAGGTTCTGTGTTTGGTACTGGGAGCACCATATTAG 618 0.4126 MVCRAVDCGGTQVSRTIIVDQSGKSGFRTIQAAIDSIKTNNNQWVKIHIVAGTYKEKVQIPQEKLCIFLEGQGKQVTTITYNDHQRTDISATFSSFANNVIATGITFKNSFAIPVRSFGVRIPALAARIHGDKSAFIDCRFIGFQDTLWDVKGRHYYKNCLIEGAVDFIFGYGQSYFEHKDAVQIATQVVLCFNEVLCLVLGAPY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02043 205 ProSitePatterns Pectinesterase signature 2. 162 171 IPR033131 -
Pumo3g02043 205 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 180 - -
Pumo3g02043 205 Pfam Pectinesterase 17 179 IPR000070 GO:0030599|GO:0042545
Pumo3g02043 205 Gene3D - 10 190 IPR012334 -
Pumo3g02043 205 SUPERFAMILY Pectin lyase-like 11 182 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02043 Pumo-Chr3 31906157 31908554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02043 7 178 Carbohydrate Esterase AT2G19150 51.163 1.12e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02043 - - gmx:100800737 288.5