Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02042 ATGGAGCTACTTCCTCGAGAAATCATTTTTTCTCTTATTTTGTTCATTATCTGTTCCTTAAGGGTTTGTAGAGCAGTGGATTGTGGTGGCACACAAGTTTCATATACCATCACAGTCGACAAGTATGGCCAATCAGGTTTCAAAACGATTCAAGCCGCCATTGATTCAGTGCATACATACAACAATCGATGGGTGAAAATTTACATAAAGGCTGGCACATACATAGAGAAGGTTCAAATTCCATCTAACAAGCCGTGCATCTATTTGAATGGCCAAGGCAAAGAAGTCACCACTATTACATATAATGACCACCAAAGAACAGATCTCAGTGCCACGTTCTCTTCGTATCCAAACAACGTTGCTGCATCAGGCATTACTTTTAAGAACTCGTTCGCTATTGCGGCAGTATTGAGAAGTTTTGGGGTTCGGATCCCAGCATTGGCTGCAAGGATATATGGAGACAAATCTGCTTTTTACGATTGTAATTTCATCGGTTTTCAAGATACGATATGGGATGTGGAAGGTCGTCACTACTTTAAAAATTGCCTCATTGAAGGTGCCGTAGACTTCATATTTGGCAATGGACAGTCCTATTTTGAGGATTGCGTTCTCAATGTGACTTCTTCGGGTTCCATAACAGCACAAGGACGCAATTCAAATAGCGACCCAAGTGGTTTTGTGTTCCAACGGGGTTCTGTGGTTGGTAGTGGGAGCACGGGCCAGGTGCCGATACTTCGAAACGGGTTTCTTGGATGA 756 0.4272 MELLPREIIFSLILFIICSLRVCRAVDCGGTQVSYTITVDKYGQSGFKTIQAAIDSVHTYNNRWVKIYIKAGTYIEKVQIPSNKPCIYLNGQGKEVTTITYNDHQRTDLSATFSSYPNNVAASGITFKNSFAIAAVLRSFGVRIPALAARIYGDKSAFYDCNFIGFQDTIWDVEGRHYFKNCLIEGAVDFIFGNGQSYFEDCVLNVTSSGSITAQGRNSNSDPSGFVFQRGSVVGSGSTGQVPILRNGFLG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02042 251 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 240 - -
Pumo3g02042 251 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Pumo3g02042 251 Pfam Pectinesterase 37 251 IPR000070 GO:0030599|GO:0042545
Pumo3g02042 251 SUPERFAMILY Pectin lyase-like 31 251 IPR011050 -
Pumo3g02042 251 Gene3D - 30 251 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02042 Pumo-Chr3 31877794 31879396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02042 10 237 Carbohydrate Esterase AT2G19150 45.763 9.64e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02042 - - gmx:100800737 358.992