Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02022 ATGGAGATCCAGAAGAAACGTTTCAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGGCAAATCTCAAAAGAAGCTGCTTTGTGACAGGCCTAACTTACCTGATGTTTCAAAGCAAGGAAAGGAAAACATGGACAGCATGCCAAAGTCACAGGACAATAGGATAAAAATGGATGACAATGGAGTAAATCCTAGCAATAATGCAAGCTGTGATTTTGATTGTGCCATATCAATTAATAGTGATGAAGGGTGTGGGACTAAGGCCCCAGGGTTAGTAGCCAGACTTATGGGTTTGGATTCATTGCCAGTTTCAACTGTCTCTGAGCTCTCCTCATCATCCACTTCATTATATGGCTCCAACTCTCTTGGATCTTCTCATTCTCATGATGAGGATTTTCTTCACTCAATGGTTGACTATTTTTGCCCTGTGGATCCCATAAATATGCGACTTAAGCCGGAGAAGTCTTCTTGGGCTGCCATGCAATCAAGGGCTCAGAAAGTGGGAAACCCGGCAATGAAGAGATTTCAGACTGAAATGTTGCCTCCAAAGTCTGCTAAACCCATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGGTTATATGCAACCTAAGCATGCAGCTCATATAATGGAGGCAGCTGCCAAAATATTTGAGGCAAGTCCCCAGCCATGTATGAGGAATAGAATGTCATCATCTGGACCTTCATCTGTTCCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATCCAAGTTCATGGATACACACACTGCTAACCCTCTGAATGGTAAGCCTAGTGAGAGGAGAAACAATTTATATAAATCCACTTCAAGTTTCAAAGGTTCGAGAGATTCAGAAAAGAACAGTTCTCGTCAGTTGGCAAGCAAAGGAAAATCTGCTTCACTTGCAATGCCATCTAAAACCAATGTTCAGAGCCGTGATGAATTGACATTGAATGGTAATAGGAGATATATGAAGCAGAAAGAACAGAATGATATAAAATCAAACCTGCCTAGGAGCCAGAAGAAACAAATTGCAGACCGGGCCAGGGACATGCAGCAGAGAGCTTGTACAGGCCAGAATAGCAATGTGCTTGGGAAGAATAATCAAAAGCAGAATAGTGTAACCAACAAAGGTAGTTCAGCTTCAAAGGTGGACTCCAATAAGCCAACCCGAACTTGGTCTTCAGAAAGTTCTACTGGAGCAAAGAAGACCACAAAAAAGGGAGCTGTAAATGCCAACATTGAGCCCAAAAGGTTAGGCACAAGGGTCACTGATACCATAAAGGAGTTTCCAGTTTCCAAAAGGAAGAGTATTTCCCAAAAGAAAAACTATATCAGTAGGGATGTTCACAATGAGGCAAGAGGTTCTGATAGTGCAGCTAATACTTATGAAAACAAGTCCATAAAATGCAATATTACAACCGATGGAAGTATTGACCAAGATTCATTTAGCACGAAAGGAAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAATATGCCCGAGTTACAGTCCTCTACTGAGCAAGAGATGGGAACAAGGAACAAAATTGATGTCAACTCTGGTAGTAATAGTGATAAGCTTTATCCCCAAAAGTCATCATTTTCTCCTCCCAGGTTACATGTAATAGACGGTGATGCTTTAAGTGTTCTTTTGGAGAAAAAGCTGCAAGAATTGACATCTAGAATTAATCCACCTCAGTGCTCCCTCACGACAGAAGGGTCTTCTACTGGTTTAAGATCTAGTTTGGAAGACAAATTTCAAAGTGTGTTAAGCACCACAGTAAGGGAACAAGACAGAAGCTTTCACAATAAATTGGACAGCATACATGACAATTGTTCTTCAAGTGATATTGTGGTGCTTAGCATGAAACAGCAACTGCAGACATCAGAATCAATGGAAGAGCCTAGCTGTAGCAGCAACAGTGAAAGCAAAAATGGAAGTTACTTAGATAGTGCATATGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAGGTATCTAATTTTTCTCCAATGAATGAATCTATGTCACTCGAAAACGAGGCAGAATGGTCTGAGCAAAGCTCTTCCACAGTGATGGGGGATAACATGATTGCCGTTGAACAATCAAGTGTAATGTCAAATTCGGTCGAATTTACAAGATCAGCAAGGAACATGGAACTTGAATATGTAAAGGATATACTCAACAATGCAGAGTTGATGACAGAAGAATTTGTGGTGGGTGAGACAGATAAGATCATAATGCCAAATATCTTTGATCTGTTGGAGAATAAGTGCATTGGGGCAGAAAACTATGAAAAACACTCTAAGATTGAGAAGAAGGCTATATTTGACACTATGAGTGAGTGCCTAGAATTAAGATGTAGACAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGGTGGCTTCAGTTCAGAGGAAGAACTCTTTAGCAGAAGAATTGTACAAGGAAATGCTGAGCCTTAGAAGTATGGAAGAAGAGGTAGAGGTGGATGAGCTTGTTAGCAAGGACATGAGCACCCGATGGGGTAAATGGCTTGACTTTGACATTGAAGCCTTTGAAGAGGGTTCTGAACTTGAATTTGATATTCTAACCTGTTTGATTAACGAATTGGTTTCTGATTTGTTGCACGTTTAA 2688 0.4055 MEIQKKRFKGSFLSFFDWNGKSQKKLLCDRPNLPDVSKQGKENMDSMPKSQDNRIKMDDNGVNPSNNASCDFDCAISINSDEGCGTKAPGLVARLMGLDSLPVSTVSELSSSSTSLYGSNSLGSSHSHDEDFLHSMVDYFCPVDPINMRLKPEKSSWAAMQSRAQKVGNPAMKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGYMQPKHAAHIMEAAAKIFEASPQPCMRNRMSSSGPSSVPLRILDLKEKLEAAQYESKFMDTHTANPLNGKPSERRNNLYKSTSSFKGSRDSEKNSSRQLASKGKSASLAMPSKTNVQSRDELTLNGNRRYMKQKEQNDIKSNLPRSQKKQIADRARDMQQRACTGQNSNVLGKNNQKQNSVTNKGSSASKVDSNKPTRTWSSESSTGAKKTTKKGAVNANIEPKRLGTRVTDTIKEFPVSKRKSISQKKNYISRDVHNEARGSDSAANTYENKSIKCNITTDGSIDQDSFSTKGSNGVISFTFTSPLRRNMPELQSSTEQEMGTRNKIDVNSGSNSDKLYPQKSSFSPPRLHVIDGDALSVLLEKKLQELTSRINPPQCSLTTEGSSTGLRSSLEDKFQSVLSTTVREQDRSFHNKLDSIHDNCSSSDIVVLSMKQQLQTSESMEEPSCSSNSESKNGSYLDSAYGSTVYSSMQDEEVSNFSPMNESMSLENEAEWSEQSSSTVMGDNMIAVEQSSVMSNSVEFTRSARNMELEYVKDILNNAELMTEEFVVGETDKIIMPNIFDLLENKCIGAENYEKHSKIEKKAIFDTMSECLELRCRQVFVGSCKAWPKWVASVQRKNSLAEELYKEMLSLRSMEEEVEVDELVSKDMSTRWGKWLDFDIEAFEEGSELEFDILTCLINELVSDLLHV 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02022 895 MobiDBLite consensus disorder prediction 512 548 - -
Pumo3g02022 895 Pfam Domain of unknown function (DUF4378) 735 887 IPR025486 -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 363 416 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 31 50 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 301 327 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 639 661 - -
Pumo3g02022 895 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 891 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 512 546 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 263 288 - -
Pumo3g02022 895 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 263 427 - -
Pumo3g02022 895 MobiDBLite consensus disorder prediction 328 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02022 Pumo-Chr3 31443178 31447794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02022 3 893 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.131 6.63e-99 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02022 - - gmx:102665160 1514.21