Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02012 ATGGCGCCAGAGCTAGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAAAAGCATGGAAGCCGTTTAAGCGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTTAAGAAGGAACGAAGCAGCCGCGTGGCTGCGAAAGACAGCCGGAGTTGTTGGAGGGAAAGACATGCCAGGAGAGCCTACTGAAGAAGATTTCAGGATTGCATTGCGTAGTGGCATTGTCCTTTGCAATGCTCTCAACAATATTCAACCCGGAGCAGTGCCAAAGGTAGTTGAAGCCCCCAGCGATAGTGTTATTATTCCTGATGGGGCAGCTCTGTCTGCTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTAACTGTGGAGGAAATGGGGCTTCCCACCTTTGAAGTTTCTGATTTGGAACAGGGAGGGAAGTCTTCGAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTACAATGAATGGCAACTAGGAGGAAAAAATGGGTCATGGAAATATGGTGGGAATCCAAAGCCACCTACTCCTTCTGCGAAACCTATTCTGAGGAAAAACTCAGAACCATTCATGAGGTCTTTGTCAAGGGGTATTTCGTTAGGCGATAAAGATGGTTTGCTGAATGATAATTCTCCAAACAGTGGTGAAGGGGGTTCTATTCCCTCCTTGAGCTCACTAGTTCGTGAAATTTTATCCGATAAGAAGCAAGAAGAGATTCCCATTGTGGTGGAGTCTCTACTTAGCAAAGTCATGGAGGAGTTTGAACAACGCTTGCTAATCCAACAAGAAACGTTCAAAACAACTCAAGCAGATAAGGCACCACCTGAAGCAGAGGATTCTAATGTGGAAGCTGCTTGTGATGATGAAGAGATGGAAGAAGATGAAGATGTAGAAGTTAAACAAGAGGAATGCAATGATGTGAAGTACAATGGCGAAGAAGAATCAAGCAGCCAGTCTTTGAAGCAGCAAAAGTTATTTCAGCAGCAAAATGAAAACGTTCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATGCAGGTTCTGCAACATAAATATCAGGAGGATATAATCTATCTAAGTAAGCACCTGCTTGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAGTTCTTGAAGAAAACCGCAAGTTATATAATCAATTGCAAGACCTGAAAGGAAATATTAGGGTGTACTGCAGAGTTCGACCCTCAACACGTGGCCAATCAAACCATCATTGCCCTATCAGTAACATAGATGAAGGAAGTATCTCACTCATAGTACCTTCCAAAAACGGGAAAGATGGAAAGAAGACATTTAATTTCAACAGAGTGTTTGGTCCTTCTTCAACCCAAGGGGAGGTTTTCTCAGATACACAACCATTGATTCGTTCGGTTCTTGATGGCTACAATGTGTGTATATTTGCTTATGGCCAGACAGGATCAGGAAAAACATACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTAGGTGTCAACTACCGCGCACTGAGAGATCTTTTTTTCCTCTCGGAGCAGAGGAAAGATACAATTCACTATGATATATTTGTTCAGATGCTTGAGATTTACAATGAACAAGTCAGAGACCTATTAATCACAGACAAAATTCGCAACAGTTCCCATAATGGCATTAACGTGCCAGATGCAAGCCTGGTTCCTGTTTCATCCACTTCCGATGTCTTAAATTTAATGAACTTGGGACAAAAGAATCGGGCAGTTAGTGCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACCTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAAGAGGCTCAACATATTAACAAGTCACTTTCTGCTTTAGGAGATGTGATTGCTTCCCTTGCCCAAAAGCAATCACACGTTCCCTATAGGAACAGCAAACTTACTCAGCTGCTTCAAGATTCTCTTGGAGGACAAGCAAAGACACTAATGTTTGTTCATGTTAGTCCGGAGCCTGAAGCTGTTGGAGAAACAATTAGTACATTGAAGTTTGCAGAAAGGGTCTCCACTATTGAACTTGGTGCTGCACGAGTTAACAAAGATAGTGCAGAGGTCAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCTGCCTCAGCCAGAAAAGATGGAGAATTGGAACACTTTCAACAGTCTGCAAATAGCATTACTGAAACACCAAAGTTGAAACCTGAATTGAATTCCCTTGCACGGTCACCTAGTTGGTCGCACGGAGGTCGTAAGCCACCAAGGGATGATCCTAGTAGCACGGAGGACAAGAAAAAGGCTACACCCAAGCTCACGAAAAGACGAAGCCTTGATCCCTTGGACATATATAGGGATTCACCCCCGTGGCCACATCATGCAGGGATAAATGGAAAGGAGGATGATAAGGAATCGGTTTCTGGGGATTGTGTTGATAAGAGTACAAAAAGGAATGGGCACTTAACTACTGATGGACAGTATGAAACAGAAAGCAAACGTCCATCTTCTCCAATGCTAAGTCCCCCGTTTCTTTTAGACCCTTCAAAAACATGCATGGAGGTGGCCACCACAAATGACTCTGATGAGCTTGAGTTAGCAACTAGTGAAAGTTCAGAATCAGACAAGAGTTGGCAATCACATGCACGTGTACCTAGAACAACCTCTTTGCCCAACGGGTTAGCGTCCAAAACAAGGAAATCAGCTCATCCAAGACAAGCCAAGAACCAAGAAAACAGGAGTATGATCCCGTTATTGTCTCCTTCATCATCAAGGAGACAAACCACCGTAGTTAGTCAACTAAGAAAGCATCCAGATGCAAAGAGAAGAAGTGGAAATGCCAAATGA 2958 0.431 MAPELALPFSVVSVVEDVLQKHGSRLSDIDLASRKAEEASLRRNEAAAWLRKTAGVVGGKDMPGEPTEEDFRIALRSGIVLCNALNNIQPGAVPKVVEAPSDSVIIPDGAALSAYQYFENVRNFLVTVEEMGLPTFEVSDLEQGGKSSRIVNCVLALKSYNEWQLGGKNGSWKYGGNPKPPTPSAKPILRKNSEPFMRSLSRGISLGDKDGLLNDNSPNSGEGGSIPSLSSLVREILSDKKQEEIPIVVESLLSKVMEEFEQRLLIQQETFKTTQADKAPPEAEDSNVEAACDDEEMEEDEDVEVKQEECNDVKYNGEEESSSQSLKQQKLFQQQNENVQELKMMVHQTKTGMQVLQHKYQEDIIYLSKHLLGLASAASGYQKVLEENRKLYNQLQDLKGNIRVYCRVRPSTRGQSNHHCPISNIDEGSISLIVPSKNGKDGKKTFNFNRVFGPSSTQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDNYTEETVGVNYRALRDLFFLSEQRKDTIHYDIFVQMLEIYNEQVRDLLITDKIRNSSHNGINVPDASLVPVSSTSDVLNLMNLGQKNRAVSATAMNDRSSRSHSCLTVHVQGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEPEAVGETISTLKFAERVSTIELGAARVNKDSAEVKELKEQIASLKAASARKDGELEHFQQSANSITETPKLKPELNSLARSPSWSHGGRKPPRDDPSSTEDKKKATPKLTKRRSLDPLDIYRDSPPWPHHAGINGKEDDKESVSGDCVDKSTKRNGHLTTDGQYETESKRPSSPMLSPPFLLDPSKTCMEVATTNDSDELELATSESSESDKSWQSHARVPRTTSLPNGLASKTRKSAHPRQAKNQENRSMIPLLSPSSSRRQTTVVSQLRKHPDAKRRSGNAK 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02012 985 Coils Coil 728 755 - -
Pumo3g02012 985 Gene3D Kinesin motor domain 344 723 IPR036961 -
Pumo3g02012 985 SUPERFAMILY Calponin-homology domain, CH-domain 34 183 IPR036872 -
Pumo3g02012 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 757 IPR027417 -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 945 971 - -
Pumo3g02012 985 Coils Coil 381 401 - -
Pumo3g02012 985 Gene3D - 33 163 IPR036872 -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 918 933 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 833 857 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 207 228 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 272 306 - -
Pumo3g02012 985 ProSiteProfiles Kinesin motor domain profile. 401 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 MobiDBLite consensus disorder prediction 212 227 - -
Pumo3g02012 985 CDD KISc_C_terminal 399 723 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 170 189 - -
Pumo3g02012 985 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 937 IPR027640 GO:0003777|GO:0007018
Pumo3g02012 985 MobiDBLite consensus disorder prediction 889 912 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 858 874 - -
Pumo3g02012 985 FunFam Kinesin-like protein KIN-14I isoform A 396 763 - -
Pumo3g02012 985 MobiDBLite consensus disorder prediction 788 820 - -
Pumo3g02012 985 SMART ch_5 42 160 IPR001715 GO:0005515
Pumo3g02012 985 CDD CH_AtKIN14-like 42 159 - -
Pumo3g02012 985 SMART kinesin_4 399 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 Pfam Calponin homology (CH) domain 42 162 IPR001715 GO:0005515
Pumo3g02012 985 MobiDBLite consensus disorder prediction 749 985 - -
Pumo3g02012 985 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Pumo3g02012 985 Pfam Kinesin motor domain 407 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02012 985 MobiDBLite consensus disorder prediction 287 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02012 Pumo-Chr3 31306075 31312229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02012 389 755 Calmodulin-binding Proteins AT5G65930 40.691 2.45e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02012 K10406 - gmx:100808197 1588.16