Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02011 ATGAGTAGGACTGAATTATCTAATATGAAGCAACCTCCTGTTCCGCTGGCAACCCTGATTGGCCGGGAACTACGAAATGGAAAAATCGAAAAGCCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCAGAGAGTTCATGGGGATTCATCAACACTGTTTTCTGTCTTTGCGATCTTTGATGGGCACAATGGTATATCTGCTGCTATTTTTGCGAAGGAAAACATACTAAGTAATGTTTTGAGTGCAATACCGCAAGATATCAGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCTTTTGTAAAAACTGACATCGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTGATTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATGCTCAGGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAATGTATTTGGAGGCAATGAGGTAGGGCCACTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGATACAGACGTGGGAGAATTCATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGGGGTGTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCTTCAGATCGTCCTGTGTTACCAACAATTCCAAGAAAGAAACGTAATGTGCTAACTTCCCTTCTCTTTGGAAAGAAATCTCAAAACTCTACAAACAAAGGCACCAATAAGCTTTCTGCCGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGATTAGGCAAGGATTTTCCATCTAATATGAATTCTGGGATTTTCCGCTGTGCGGTTTGCCAAGCAGATCAGCCCTCTGGAGATGGTATATCAATGAACACTGGGTCTTTTTTCCCCCCAGTATCTAAGTCATGGGAAGGTCCGTTCCTCTGCACAAATTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTACCAGGCCCTCAGAGACAGCATAG 1287 0.4398 MSRTELSNMKQPPVPLATLIGRELRNGKIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVHGDSSTLFSVFAIFDGHNGISAAIFAKENILSNVLSAIPQDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDAQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDRPVLPTIPRKKRNVLTSLLFGKKSQNSTNKGTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNMNSGIFRCAVCQADQPSGDGISMNTGSFFPPVSKSWEGPFLCTNCQKKKDAMEGKRSTRPSETA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02011 428 Gene3D - 34 302 IPR036457 -
Pumo3g02011 428 SMART PP2C_4 23 295 IPR001932 -
Pumo3g02011 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Pumo3g02011 428 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Pumo3g02011 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Pumo3g02011 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Pumo3g02011 428 Pfam Protein phosphatase 2C 62 281 IPR001932 -
Pumo3g02011 428 CDD PP2Cc 43 297 IPR001932 -
Pumo3g02011 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02011 Pumo-Chr3 31283352 31286219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02011 1 427 PP2C-type Phosphatase Gene Family AT1G09160 75.410 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02011 - - gmx:100794630 801.201