Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02006 ATGGGGCATTTTTCATCTGCGTTCAATCGGTTGGCAAAGTCGTTTGCAACGAAGAAAGGGAGGAGTTCTGGTGGATGTAACGGAAGAGAAGCTGCAGAAGCAATGGCAAAGGAAGCTAAAAAAAATCACTTCATAATGCATAGCTCTGGCACCGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAAAGGCCAGAAAGGAGTCAATCAAGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGGCACGGGCCATGGGGTCATTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCCAGATGTTGGTGTTGATATAGAGATGGAGAAAAAACAAAATCGGTTTAACGTATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCGTTGATCAAGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGCGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTGTCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCCACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAATAGATTTCAAGCCCAATTTACCTCAGGAGGAAGAGCGAATACTTGAGTCCCAAGGACGAGTTTTCTGCTTAGACGACGAGCCAGGGGTGCACAGGGTGTGGTTGCCGGATGAGGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGTGTCAAAAAGTATGGTCTTATTTCAGTGCCAGAGGTAACACAAAGGAATATAACCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAGTCTCCAATCAAGAAGCGGTGGATATTGTGTCTTCAACACCAGACAGAACAGACTCGGCTAAACGTTTAGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGCGAGGCTTTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCACTTCACCAAGTTGCATTGCCACCCTAG 1104 0.4538 MGHFSSAFNRLAKSFATKKGRSSGGCNGREAAEAMAKEAKKNHFIMHSSGTVNVDGSNNFASVFSKKGQKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTSLDPDVGVDIEMEKKQNRFNVWKHSYLKTCAAVDQELEQNRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEEERILESQGRVFCLDDEPGVHRVWLPDEESPGLAMSRAFGDYCVKKYGLISVPEVTQRNITTKDQFVVLATDGVWDVVSNQEAVDIVSSTPDRTDSAKRLVECAMRAWKRKRRGFAMDDISAICLFFHSSPSLHQVALPP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02006 367 PANTHER PROTEIN PHOSPHATASE 42 352 IPR015655 GO:0004722|GO:0006470
Pumo3g02006 367 CDD PP2Cc 59 354 IPR001932 -
Pumo3g02006 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Pumo3g02006 367 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Pumo3g02006 367 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Pumo3g02006 367 Gene3D - 48 356 IPR036457 -
Pumo3g02006 367 SMART PP2C_4 52 352 IPR001932 -
Pumo3g02006 367 FunFam Probable protein phosphatase 2C 34 51 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02006 Pumo-Chr3 31245601 31249136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02006 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.950 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02006 - - gmx:100793051 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02006 3 31245601 31249136 Pumo3g02006 3 31245601 31249136 ECH
Pumo5g03616 5 85639251 85648495 Pumo3g02006 3 31245601 31249136 PCT