Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02001 ATGGCCACAAACATGAAGACATGGACTACCTTGTACACCCTCGTTTTCCTCTTCACCCTCTTTCTTTCTTCATCACATGCAGCTTTCTCCTCCACTCCAAATGACTCATGCGACACTACACCCTACCCAGCATTCTGCAAAACTACTCTGCCTTCTCAATATTTATCCATACATGACCAATGCCGTTTCTTCCTTCAACAATCCTTATCAATAACAAAAACCATTTTTAATTTGGTCTCTACTTATCTCAAAAACCACTACACCATTCCTGATTCAACAGTGCACGCCCTTGAAGATTGTCTTAATCTTGCAGAACTGAACATTGATTTCTTGTCCGATGTCCTCCAAGCCATTGAAAACACCGTGACTAGCGACCAGGTCTATGATTTGCAAACCTTGCTTAGTTCCATTTTAACCAACCAACAAACGTGCTTGGATGGTTTTAAAGAGGTAACACCTTATCCTATAGTTACCAGTGCCTTATCAAGCCCACTTTCTGATGCAATCAAACTATATAGCATATCTTTAGCCCTTTTCACCCGTGGTTGGGTCAACGATGCCACCACAGGAAGTTCAACTACAGTTGAAACTATTATTAATAGAAAGTTACTGCAAACAAGCGTCGACAATGTGGTGGTGACACAAAAAGTGGTGGTGAACCCAGATGGGTCTGGTGATTTCACCACCATAAATGATGCAGTGGGTGCTGCACCTAACAATACCGGCACCAACAACGGGTACCATGTAATTTATGTGGCCGCTGGGATTTACAATGAGTACGTGTCTATTCCTAAGAGCAAGCAGAACCTAATGATCGTTGGAGATGGCATCAACCGCACTGTGCTCACTGGCAATCGAAGCGTGGTTGATGGTTGGACCACTTTCCAATCTGCGACTTTTGCTGTGGTTGGAAAAGGGTTTGTTGCAGTGAACATAACATTTCGCAACACAGCGGGGCCCATCAAGCATCAAGCGGTGGCAATGAGAAACGGGGCCGACATGTCCACGTTCTACAACTGTAGTTTTGAAGGTTACCAAGACACACTGTACGTACATTCCCTAAGGCAATTCTACAAAAGCTGCGACATTTATGGCACAGTGGATTTCATATTTGGCAATGCAGCAGCAGTATTCCAGGATTGTAACATGTACCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGCCGAACGGATCCAAATCAAAACACTGGCATCTCCATACAAAATTGTTGCATAATAGCAGCCAGTGATTTGGGTGATTCTACTAACAATTATAATGGGATAAAGACATATTTGGGTCGGCCTTGGAAGGAGTATTCAAGGACTGTGTACATGCAATCTTTCATGGATGGCCTAATTGATCCAAAGGGGTGGAACGAATGGTCAGGGGATTTTGCTTTGAGCACGCTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACACTAGCAATAGGGTCACATGGGAAGGGTACCATCTCATTGACGAAAAGGATGCGCTTGATTTCACGGTGCACAAGTTTATTCAAGGTGACAAATGGCTGCCCCAGACAGGAGTGCCTTTCAAAGCTGGGTTACAGTGA 1602 0.4401 MATNMKTWTTLYTLVFLFTLFLSSSHAAFSSTPNDSCDTTPYPAFCKTTLPSQYLSIHDQCRFFLQQSLSITKTIFNLVSTYLKNHYTIPDSTVHALEDCLNLAELNIDFLSDVLQAIENTVTSDQVYDLQTLLSSILTNQQTCLDGFKEVTPYPIVTSALSSPLSDAIKLYSISLALFTRGWVNDATTGSSTTVETIINRKLLQTSVDNVVVTQKVVVNPDGSGDFTTINDAVGAAPNNTGTNNGYHVIYVAAGIYNEYVSIPKSKQNLMIVGDGINRTVLTGNRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGPIKHQAVAMRNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAAAVFQDCNMYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCIIAASDLGDSTNNYNGIKTYLGRPWKEYSRTVYMQSFMDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLIDEKDALDFTVHKFIQGDKWLPQTGVPFKAGLQ 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02001 533 Coils Coil 101 121 - -
Pumo3g02001 533 PANTHER PECTINESTERASE 21 522 - -
Pumo3g02001 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 181 IPR035513 -
Pumo3g02001 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 181 IPR035513 -
Pumo3g02001 533 NCBIfam pectinesterase inhibitor domain 12 179 IPR006501 GO:0004857
Pumo3g02001 533 Pfam Pectinesterase 217 518 IPR000070 GO:0030599|GO:0042545
Pumo3g02001 533 ProSitePatterns Pectinesterase signature 2. 363 372 IPR033131 -
Pumo3g02001 533 SMART PMEI_2 28 178 IPR006501 GO:0004857
Pumo3g02001 533 CDD PMEI-like_3 36 183 - -
Pumo3g02001 533 SUPERFAMILY Pectin lyase-like 216 531 IPR011050 -
Pumo3g02001 533 Pfam Plant invertase/pectin methylesterase inhibitor 34 178 IPR006501 GO:0004857
Pumo3g02001 533 FunFam Pectinesterase 210 532 - -
Pumo3g02001 533 Gene3D - 210 532 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02001 Pumo-Chr3 31159700 31161830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02001 14 532 Carbohydrate Esterase AT4G02330 52.557 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02001 K01051 - gmx:100810329 947.962