Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01972 ATGGCTGATTTTCAGACCTCTACCCACCGAGCCAAGTGGATTTTCTCTCCTCAACAGCTGGTTGAGAAATATAGAGCTGCCAATCAGAGAGCCAAACAAATTCTAGAGAAGTGTGGAGCAACTCTAATGGAAGTAGATGTCGATGGGTCGTTGTCATATCCTGAATCCCAGATGACTGCAAAGGACAGTGCTGAAAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGTATAAGGGTATTTTATGAAAACAAGCTGCAAGAAGTATGTAACAATTTCCGATTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATCGTTTATGCACCATATCGCTCAATTGAAGGTTTTATAAATGATATGGAGGAATTCTGTAATGCTGGTGATGATCAGCTTGAAATGCTCAAGACTTTGCAAGAGACAGCAAGATTTGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTACGCAACTCAAATGCGCTCCATAGAGTCGTTGACTTCGATAGTTATCTTGGGGGCATTTTTTCCCGTCAGAATTCCATGCATACAATGTCCGAGCTTTCTGAATCACTGAATGCAATTGATTCCTGGGTTAGAAAATACAGAAGTCCTTCTGACAAGGAATTGAAGCATATCAACCGCAAACTTAAGTCTTGTTGGGGTCAAAGCTCTCATGACGAGTACTTCCTTTACCCTCAAATAGAATTACCTGCCGGTCCTACAGATCCACACACACACACACACAAAAAGATGTTTCATAGAAAAAATTGTGTTATATAA 1026 0.3977 MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVDGSLSYPESQMTAKDSAEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSIEGFINDMEEFCNAGDDQLEMLKTLQETARFEVDKMMLTDAPLLFPPGQLALAALRNSNALHRVVDFDSYLGGIFSRQNSMHTMSELSESLNAIDSWVRKYRSPSDKELKHINRKLKSCWGQSSHDEYFLYPQIELPAGPTDPHTHTHKKMFHRKNCVI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01972 341 Gene3D - 63 175 - -
Pumo3g01972 341 SMART cyclin_7 87 168 IPR013763 -
Pumo3g01972 341 FunFam cyclin-H1-1 63 175 - -
Pumo3g01972 341 PANTHER CYCLIN 60 279 IPR043198 GO:0006357|GO:0016538
Pumo3g01972 341 CDD CYCLIN_AcCycH_rpt2 177 301 - -
Pumo3g01972 341 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Pumo3g01972 341 FunFam Cyclin h 177 282 - -
Pumo3g01972 341 Pfam Cyclin, N-terminal domain 79 174 IPR006671 -
Pumo3g01972 341 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Pumo3g01972 341 Gene3D - 177 282 - -
Pumo3g01972 341 Pfam Cyclin C-terminal domain 179 276 IPR031658 -
Pumo3g01972 341 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01972 Pumo-Chr3 30855588 30861171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01972 1 280 Core Cell Cycle Gene Families AT5G27620 66.429 6.12e-138 392