Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01966 ATGAACGATCAATCCATTCAAATTCAAATGCTCGCTGAAAAATTCCATCGCTTCGTTCTTGACTGCGAACTCAAGCAACCGTCAATCGCTCACCGCTCAGATATTGTGTCAAAGCAAGTGAACGAGAACTCTGACTCCATGGATGAAAACAGTATGTCCAATGGAATCCATGAAGTTTCTCCTGATAAGGGTCACACACTTCCCATATTGAAAAAGATACTTGATCTCAGTACTAAAATTCAGGATTTGAAGAAGCAGCATATAGCCTTGTCTGATGAAGTGAAACTCACTACTGAATCTTTTCCGGGCACTGATGTTTTGAAGTCTGTGCAGCTTCTCGGTGCTGAATATGAACTCTTAAAAAGAAAGTACCTGGAGGAGTCCTCTGAGCGGAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGGCCATTAAATGAGAGTGAAATTGCTAATGGTTTTGCATCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTAATTTGTGCAGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTTGGGCCAGAAGATAACCAAGAGGCTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTACAATGTCTGCATATTTGCTTACGGGCAAACAGGAACTGGGAAAACATTTACAATGGAAGGAACACCAGAACACAGGGGAGTTAACTACAGAACCCTGGAAGAATTATTTCGGATAACTGAAGAGAAACATGGTACAATGAAGTATGAATTGTCTGTTAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCTACCCAACCTACTAAGAACTTGTTACGAGTAACTGTAATGGGGGAAAATTTAATCAATGGCCAGAGAACAAAGAGCCACCTTTGGCTAGTCGACTTAGCTGGCAGTGAGCGTGTGGGAAAAACTGAAGCTGAAGGAGAAAGGCTGAAGGAATCTCAATTCATAAATAAGTCACTTTCAGCACTTGGTGATGTTATTTCTGCCCTTGCTTCCAAATCATCCCACATCCCTTACAGGAACTCAAAACTCACTCATATGCTGCAAAGTTCTTTAGGAGGAGACTGCAAAACTTTAATGTTTGTGCAAGTAAGTCCAAGTTCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTTGCCACCCGTGTCCGTGGAATCGAGAGTGGCCCAGCTCGCAAGCAAGTAGACCACACGGAGCTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGATGAGAAGGAAACAAAGAAATTACAGGATAGCTTGCAAATCATGCAACTCAGGCTTGCTGCAAGAGAACACCACTGTAGAACCCTTCAGGAAAAGGTTCGGGACCTTGAGAACCAGATTGCAGAAGAAAGAAAAACCAGACTCAAGCAAGAAAGTAGGTCTCTTGCTGCAGTCTCAGCTCAACCTTCATCATCAATAGCTCATAAAACCATGACAGACAAGAAGCCGCCACTGAATCCTTCAAATCTGAGACTGCCACTGAGAAGAATAACCAACTCCTTGCCTCCACGGTCTCCTCTAAGATCGAAGAGTTACACAGCTTTCATGAGTGGAAAGGAAAACTCTGTCAGAAGGAACTCAGTGGCGACGAATGCTGTAAGGCCAGCTGTTCCATCAACAACAGCGCAGTTCCTTCAGGCAAGGAGGCGGGTGTCCGTTGCTGTGAGACCGCCTGCACAATCAACATCACAGGTCTTTCAGCCAAGGAGGAGGGTCTCCATTGCCACACTACCTTCTCACACAACTTCTGACATAACAACTCCACTCCGTACCTCAGCATTCCGAGTTACCAGTGGAAGCAGCCAACAATCACGGATAAGAAGCCAAAGGAAAGATCGGTATTCAAGTTTGTTCGCCCCATTGCCAGAGTTGAGGACATCAGTTGAGACAACTCCAATGTCTGTAAGGAGCAGCAGCAAGTTTATGATGAGCAGTCCAGTACAGGCAGATTCCAGGGAAGGAGGACCCACTAGGCATCCAACTCTTCTTGCACTTCAACGTAAGCCTGTGGTCTGGAGTCCTCTTAAGCTAAGAGGCGTGAAAAGTAACAGAAAGTCATCACTCTTGCCATATCGCCCAACCCAAATGCAATAG 2193 0.4382 MNDQSIQIQMLAEKFHRFVLDCELKQPSIAHRSDIVSKQVNENSDSMDENSMSNGIHEVSPDKGHTLPILKKILDLSTKIQDLKKQHIALSDEVKLTTESFPGTDVLKSVQLLGAEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNESEIANGFASVVNFESSSDNELQVICADSSKKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEEKHGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKNLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSSHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFATRVRGIESGPARKQVDHTELFKYKQMVEKLKQDEKETKKLQDSLQIMQLRLAAREHHCRTLQEKVRDLENQIAEERKTRLKQESRSLAAVSAQPSSSIAHKTMTDKKPPLNPSNLRLPLRRITNSLPPRSPLRSKSYTAFMSGKENSVRRNSVATNAVRPAVPSTTAQFLQARRRVSVAVRPPAQSTSQVFQPRRRVSIATLPSHTTSDITTPLRTSAFRVTSGSSQQSRIRSQRKDRYSSLFAPLPELRTSVETTPMSVRSSSKFMMSSPVQADSREGGPTRHPTLLALQRKPVVWSPLKLRGVKSNRKSSLLPYRPTQMQ 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01966 730 Coils Coil 73 93 - -
Pumo3g01966 730 Coils Coil 431 493 - -
Pumo3g01966 730 Pfam Kinesin motor domain 298 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 MobiDBLite consensus disorder prediction 663 679 - -
Pumo3g01966 730 ProSitePatterns Kinesin motor domain signature. 314 325 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo3g01966 730 ProSiteProfiles Kinesin motor domain profile. 144 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 Gene3D Kinesin motor domain 298 457 IPR036961 -
Pumo3g01966 730 MobiDBLite consensus disorder prediction 663 690 - -
Pumo3g01966 730 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 291 IPR027640 GO:0003777|GO:0007018
Pumo3g01966 730 Pfam Microtubule binding 126 285 IPR031852 GO:0008017
Pumo3g01966 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 450 IPR027417 -
Pumo3g01966 730 MobiDBLite consensus disorder prediction 44 63 - -
Pumo3g01966 730 MobiDBLite consensus disorder prediction 492 510 - -
Pumo3g01966 730 Gene3D Kinesin motor domain 87 297 IPR036961 -
Pumo3g01966 730 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 PRINTS Kinesin heavy chain signature 315 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 SMART kinesin_4 142 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01966 730 MobiDBLite consensus disorder prediction 487 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01966 Pumo-Chr3 30773509 30777593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01966 110 458 Calmodulin-binding Proteins AT5G65930 38.406 2.24e-68 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01966 K10406 - gmx:100788477 1232.62