Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01954 ATGTGGCAAGTTCACTACAAATTTGAGCTTCTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCCTCAGGCAGTGATCAGAAAGAAACTTCAGTTAGTTGGTATAATAGCTATGCTAATAGCTTGTAAGTACGAGGAGGTCTCAGTCCCTACTGTTGAGGATTTTATTCTGTTAACAGACAAGGCAAATGAAGTTTTAGCTATGGAGAAATTAATGATGAACATGTTGCAATTCAAGTTGTCTGTGGCTACTTCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGGTGAGTAATGTAGCAATGTTTTACAAAGGTTATAACACTAAAGTAACTAACGGGTATGGGATCTATGAAACTGTGCCAGCTGGAGCTCTTGTCCTTCTTCTTGATCGAGCCTTGCTTGGTGAAGTGCAAAATGCTGAAGTTTCCACCATCTTTGCTAGCTGTTGCAGCCATATACACAACTCAATGTAG 510 0.3961 MWQVHYKFELLEETLFLTVNLIDRFLEPQAVIRKKLQLVGIIAMLIACKYEEVSVPTVEDFILLTDKANEVLAMEKLMMNMLQFKLSVATSYMFMRRFLKAAHSDKKVSNVAMFYKGYNTKVTNGYGIYETVPAGALVLLLDRALLGEVQNAEVSTIFASCCSHIHNSM 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01954 169 SMART cyclin_7 1 80 IPR013763 -
Pumo3g01954 169 PANTHER CYCLINS 1 146 IPR039361 -
Pumo3g01954 169 Gene3D - 1 87 - -
Pumo3g01954 169 Gene3D - 88 115 - -
Pumo3g01954 169 Pfam Cyclin, N-terminal domain 1 87 IPR006671 -
Pumo3g01954 169 FunFam G2/mitotic-specific cyclin 1 87 - -
Pumo3g01954 169 SUPERFAMILY Cyclin-like 1 86 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01954 Pumo-Chr3 30682568 30683221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01954 2 114 Core Cell Cycle Gene Families AT1G20610 63.559 5.01e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01954 K21777 - gmx:100812029 172.94