Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01937 ATGGCTTTGTTAATGCCACCACTCCATTTTTCAACTTCGAATCTCAACACAAGCACCATTGTGGCTCTCTGTGTATTCTTCACTCTCCTTTTCACTTGCATCATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCTAATGAATCCATTGTTGCCCTCCTTCTGGGGTTCTGTGCTGGAATGGTGGTGTTGTTGGTGTCCAAGTTTCATAGTGCCAAGATTTTAATATTCAGTGAAGACTTGTTCTTTCTTTACTTGCTTCCCCCTATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACAATTATACTGCTCTTTGGAGTCCTTGGAACAGTTATTTCATTCTGTCTGATATCTGTTGGTGCTCTTCTGCTCATTCAGTGGATTGGCATAGCTAACCTCGGCATAAAAGATTACCTAGCCATCGGTGCCATATTGTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTGCTTTACAGCATTGTATTTGGGGAGGGAGTAGTAAATGATGCTACGTCTATTGTACTTTTCAATTCGGTACAATCGCTTGACTCCAGCAGCATCGATGATATGACAGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTCTTCACTAGTACTGCCCTTGGCATAGTAGTTGGTCTTTTAAGTGCTTATATTATTAAAACACTTTACCTTGGAAGGCAGTCTACTGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTGTCATATATGATCGCCGAGCTTTTGAGTCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTACATTAAGCTCAAGGACAACAACCAAGCACGCCTTTGCAACCATCTCATTCATTGCTGAAACCTTTATATTTATATGTGTTGGCATGGATACTTTAGACATTGACAAATGGAAAAGCAGCAAAGCCAGTGCAGGAACTTCAGTTGTTGTGAGTTCAACGTTGTTTGTATTGGTGTTGATTGGGAGAGCAGCTTTTGTGTTCCCTATTGCACATATTAAAAATTGCATCAAGACAACAGACAGTACCAAAATTGAGTTTCGTTCACAGTTTATCATATGGTGGGCAGGCCTAATGAGAGGTGCAGTGTCTATTGCCCTGTCTTATAACCAGTTTGCAGAAGCCAGCAGAACATCAGCTGAAGACTCTGCATTAATGATCACCTCTACTATAATCGTGGTCTTATTCAGTACTGTGGTATTTGGTTCCATTACAAAGCCTCTGATTGAGGCTGTGCAGCTAAGGCATCCAAAACCAGCCAGTTTTGATTCCTTTGGTAATACAGAAGATTTGAGTTTCCTATTGCTTGAAAGCAATGGTCCGATTAACCAAAGCAACAATCGGCCATCTCAAAGGCGAAGTAGGCTAGGTATGCTAATGAGTCATCCAACAAGAACTGTTCACTACTTTTGGAGGAAATTTGATGATAAGTTCATGAGACCCGTGTTTGGTGGAAGGGGTTTTGTTCCATTTGTTCCTGGCGAAGCAGCGGAGATTTCTTGA 1593 0.4149 MALLMPPLHFSTSNLNTSTIVALCVFFTLLFTCIIIGHLLEENRWANESIVALLLGFCAGMVVLLVSKFHSAKILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTIILLFGVLGTVISFCLISVGALLLIQWIGIANLGIKDYLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDSSSIDDMTALKLLGTFLYLFFTSTALGIVVGLLSAYIIKTLYLGRQSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTLSSRTTTKHAFATISFIAETFIFICVGMDTLDIDKWKSSKASAGTSVVVSSTLFVLVLIGRAAFVFPIAHIKNCIKTTDSTKIEFRSQFIIWWAGLMRGAVSIALSYNQFAEASRTSAEDSALMITSTIIVVLFSTVVFGSITKPLIEAVQLRHPKPASFDSFGNTEDLSFLLLESNGPINQSNNRPSQRRSRLGMLMSHPTRTVHYFWRKFDDKFMRPVFGGRGFVPFVPGEAAEIS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01937 530 Gene3D - 142 194 - -
Pumo3g01937 530 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01937 530 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01937 530 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01937 530 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01937 530 PANTHER SODIUM/HYDROGEN EXCHANGER 23 513 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pumo3g01937 530 Pfam Sodium/hydrogen exchanger family 26 440 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01937 Pumo-Chr3 30483446 30488655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01937 11 530 Antiporters AT3G05030 60.338 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01937 K14724 - zju:112490496 752.281