Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01924 ATGGCTGGGAGTAACGAACTTAACCCCAACGATTCTAAGATGGTGGTTCCGCTGAATATGTGGGTTCTGATCTCAAATTTCAAGTTGGCATACAATCTTCTCCGTCGCCCAGATGGTACTTTCAACCGGGACTTAGCAGAGTTCCTTGATCGTAAAGTTCCGGCAAATGCCAACCCTGTGGACGGAGTGTTCTCTTTTGATGTCATTGTTGACCGCGAAACCAATCTCCTGACTCGAATCTACCGTCCTGCTGAGGGAGAAGAGCGTACGTTGAATATTCTTGAGCTTGAGAAGCCTGTGAGCTCTGAGGTTGTTCCTGTTATCATATTCTTCCATGGTGGAAGTTTTGCGCATTCTTCATCCAATAGTGCTATATATGACACCCTGTGTCGTCGCCTGGTGGGTATCTGTAAGGCTGTTGTGGTGTCTGTGAACTATAGGCGTGCACCTGAGAATAGGTATCCCTGTGCATATGATGATGGGTGGACAGCTCTTAAGTGGGTTAGTTCTAGGTCTTGGCTTCAGAGTAGGAAGGATAAGAAAGTTCATATCTACATGGCTGGGGATAGCTCGGGTGGGAACATTGTGCACCATGTTGCCCTCAAGGCTGTGGAGTCGGGGATTGAAGTGTTTGGGAATATACTGCTCAACCCATTGTTTGGTGGGCAGGAAAGAACTGAGTCTGAGAAGCGTTTAGATGGGAGGTATTTTGTTAGAGTTAAGGATCGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGATAGAGACCACCCTGCATGCAACCCTTTTGGCCCCAAGGGCAAAAGCCTTGAAGGGATTACCTTCCCCAAGAGCCTTGTGGTGGTTGCTGGTTTAGACCTTGTTCAGGACTGGCAATTGGGTTATGCCAAAGGGCTTGAGAAGGCTGGCCAAGAAGTGAAATTGCTATTCCTGGAGCAAGCAACCATTGGGTTTTACTTGCTGCCAAATAATGAGCACTTCTCTCCTGTTATGGATGAGATAAAATATTTTGTCAGCCCTGACTGTTGA 1035 0.4725 MAGSNELNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPAEGEERTLNILELEKPVSSEVVPVIIFFHGGSFAHSSSNSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSRKDKKVHIYMAGDSSGGNIVHHVALKAVESGIEVFGNILLNPLFGGQERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHPACNPFGPKGKSLEGITFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQEVKLLFLEQATIGFYLLPNNEHFSPVMDEIKYFVSPDC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01924 344 FunFam Gibberellin receptor GID1 1 342 - -
Pumo3g01924 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Pumo3g01924 344 SUPERFAMILY alpha/beta-Hydrolases 33 336 IPR029058 -
Pumo3g01924 344 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Pumo3g01924 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Pumo3g01924 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 313 - -
Pumo3g01924 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01924 Pumo-Chr3 30382342 30385059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01924 1 344 Carbohydrate Esterase AT3G05120 76.522 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01924 K14493 - gmx:100815161 672.93