Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01922 ATGGAATGCAACAAGGACGAGGCTTTGAGGGCTAGGCAAATTGCCGAAGCTAGAATGCAAAGAGGTGAATTTGCGGAGGCACTCAAGTTTGCTACCAAGGCCGAAAGACTGTATGCCAACGTTGAGAACATTGCCCAGATTCTTACGGTTTGTGAGGTTCACATTGCTGCACAGAAAAAACTCTCTGCCTCTGACTTGGACTGGTATGCAATTCTTCAGATTGAAAGGCTGGCTGATGAAGCAACAGTAAAGAAACAGTACAGGAGGCTTGCACTCTTACTTCATCCTGATAAGAATAAGTTTGCCGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATAGGGTCTTGACTGACCAAGCAAAACGTTCTTTGTATGACATCAAGTTTGGAGCCTCTGTGAGAGGTGCCGCTCCTAAGACCTCGCACTCAAATGGGAATGTGTTTGCGGCAAAACATAATGCAAATGCAACAAATAATCAGAAGAGTTCTGATTCACACCATTACTCAAATGGTAATTTGTTTTCTGCAAAATATGATGCAAATGCAACAAATTATCAGAAGAATTCTTATCCAAACTCCACTGGTTCCAACAACAAAGCTGGACAGATGACATTCTGGACATCTTGCCAACATTGTAATACTAGGTACCAGTACTGCATGCTTGTTGTAAATGCAACCTTACGCTGTCAACATTGTTTGAAGTCATTTAAAGCTCATGTTATTAGATTGGGATACCAGGGTGTCTCACCATCAGAATTTGCTTCAGTAAATATCCAGAAAGAAGCTCCAATGCATGGTCCCCCAAAACCAGCCTCAGAAAGCACTGGTGGAAAACCCTTTGGTGGAGAACATGCTGGTACATTTGTGCAGTCAAATCCTACATCTGTGAAAAAATGTGCTGCTGGAGTTGGTAGCCGTTGTGAAGGTCAAAAGAGTAAAGATGGCTATGTTCCTGCATCAAGAGGCATGGAGTCACAGGCCTCCAAAAATGTTGCAAGTAAAAGAGTAAGGCAGCCAGCACCAGATTCAGCAGAAAGTTTCAAAGCTAGAAATGGTGATGAGATGAAAGATGCCAATGTTCGAGAAAATGATGTTTATCCTTCAAGAGTTAATTCTAGGAGATCTTCAAGGAATAAGCAGCATGTTTCATATGTGGAAACCTCTGAAGATGACGATTTTGAGATTCCTTCTAAAAAGCCACGGCATAATGGACCACTTAATGCCGATGAAGTTGAGAAACAGAACGTGCCTTCAAGTGGTGGGTCGTCCGTTAACAATATTCCAGCTACTTCAGCTGCTGGTGTGGCTGATCAGAACAGAGAGAAGGTATCCGAGTCAGATATTGGTCTTGGAACGTCAAAAGATGATAACTGCTCCCCATTGAATTCAGATGTTCCTTCTGGTCCAGGGATATTTCATTGTCCTGATTCAGATTTCAATGATTTTGAGAAGGATAAGGAGGAGCATTGTTTTGCTGTTAATCAGTTCTGGGCAATTTATGATACCACTGATGCGATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGGCCTCCCCTTTCCAGTTGAAGATTACTTGGTTGGAACCTGACCCAGATGACCAAGGTGAAATTGATTGGGATGATACAGAATTGCCTATTGCTTGCGGTAAGTTCAGACTTAGTGGTTCTCAGAAAACTACAGATCGTACTATGTTCTCTCATCAGGTGCGGTGCATAAAAGAAACTGGCAAAGGTTCTTATCTGGTATGTCCTAATAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCCAATCCAGAAAAACATTTGAAGTATGACTTCGAATATGTGGAAATCCTATCAGATTTTGCTGAGAATGTTGGCATCGCAGTTGCTTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGAAAACTGAGAAGAATGGAGTGAACATATTTTATGTCCGACCTAATGAACTATACAGGTTCTCACATCGAATTCCTTCTTATAAGATGACTGGTAATGAAAGGGAGGATGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCCTACTCATCTCTTTGAAGTTGGTGATTCGGGTAATGTGAAGATGTGA 2130 0.4197 MECNKDEALRARQIAEARMQRGEFAEALKFATKAERLYANVENIAQILTVCEVHIAAQKKLSASDLDWYAILQIERLADEATVKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANRVLTDQAKRSLYDIKFGASVRGAAPKTSHSNGNVFAAKHNANATNNQKSSDSHHYSNGNLFSAKYDANATNYQKNSYPNSTGSNNKAGQMTFWTSCQHCNTRYQYCMLVVNATLRCQHCLKSFKAHVIRLGYQGVSPSEFASVNIQKEAPMHGPPKPASESTGGKPFGGEHAGTFVQSNPTSVKKCAAGVGSRCEGQKSKDGYVPASRGMESQASKNVASKRVRQPAPDSAESFKARNGDEMKDANVRENDVYPSRVNSRRSSRNKQHVSYVETSEDDDFEIPSKKPRHNGPLNADEVEKQNVPSSGGSSVNNIPATSAAGVADQNREKVSESDIGLGTSKDDNCSPLNSDVPSGPGIFHCPDSDFNDFEKDKEEHCFAVNQFWAIYDTTDAMPRFYALVKKVASPFQLKITWLEPDPDDQGEIDWDDTELPIACGKFRLSGSQKTTDRTMFSHQVRCIKETGKGSYLVCPNKGETWAIFRDWDIKWSSNPEKHLKYDFEYVEILSDFAENVGIAVAYLGKVKGFVSLFQKTEKNGVNIFYVRPNELYRFSHRIPSYKMTGNEREDVPRGSFELDPAALPTHLFEVGDSGNVKM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01922 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo3g01922 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo3g01922 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo3g01922 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo3g01922 709 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Pumo3g01922 709 Gene3D DnaJ domain 53 153 IPR036869 -
Pumo3g01922 709 MobiDBLite consensus disorder prediction 381 410 - -
Pumo3g01922 709 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 701 - -
Pumo3g01922 709 CDD DnaJ 67 120 IPR001623 -
Pumo3g01922 709 SMART dnaj_3 66 123 IPR001623 -
Pumo3g01922 709 MobiDBLite consensus disorder prediction 349 365 - -
Pumo3g01922 709 MobiDBLite consensus disorder prediction 263 291 - -
Pumo3g01922 709 MobiDBLite consensus disorder prediction 303 463 - -
Pumo3g01922 709 Pfam Domain of unknown function (DUF3444) 474 678 IPR024593 -
Pumo3g01922 709 MobiDBLite consensus disorder prediction 414 435 - -
Pumo3g01922 709 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01922 Pumo-Chr3 30371513 30374043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01922 4 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.204 2.99e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01922 - - gmx:102662460 1145.95