Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01921 ATGGAATGCAACAAGGACGAGGCTTTGAGGGTTAGGCAAATTGCCGAAGCTAGAATGCAAAGAGGCGAATTTGTGGAGGCACTCAAGTTTGCTACCAAGGCCAAAAGACTGTATGCCAACGTTGAGAACATTGCCCAGATTCTTACGGTTTGTGAGGTTCACATTGCTGCAAAGAAAAAACTCTCTGCCTCTGACTTGGACTGGTATGCAATTCTTCAGATTGAAAGGCTGGCAGATGAAGCAACCGTAAAGAAACAGTACAGGAGGCTTGCACTGCTACTTCATCCTGATAAGAATAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGATCTTGACTGACCAAGCAAAACGTTCTTTGTATGAATTCAAGTTTGGAGCCCATGTGAGAGGTGCCGCTCCTAAAACCTCCCACTCAAATGGGAATGCGTTTGCGGCAAAACATAATGCAAATGCAACAAATAATCAGAAGAGTTCTGATTCACACCATTACTCAAATGGTATTGTGTTTGCTGCAAAATATGATGCAAATGCAACAAATTATCAGAAGAATTCTTATCCAAACTCCACTGGTTCCAACAACCAAGCTGGACAGATGACATTCTGGACATCTTGCCAACATTGTAATACTAGGTACCAGTACTGCATGCTTGTTGTAAATGCAACCTTACGCTGTCAACATTGTTTGAAGTCATTTAAAGCTCATGTTATTAGTTTGGGATACCAGGGTGTCTCACCATCAGTATTTGCTTCAGTAAATACTCAGAAAGAAGCTCCAATGCATGGTCCCCCAAAACCAGCCTCAGCACGCACTGGTGGAAAACCCCTTGGTGGAGAACATGGTGGTACATTTGTGCAGTCAAATCCTACATCTATGAAAAAATATGCTGCTGGAGTTGGTAGCCATTGTGAAGGTGCAAAGAGTAAAGATGGCTATGTTCCTGTATCAAGAGGCATGGATTCACAGGCCTCTAAAAATGTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAAGCTAGAAATGGTGATGGGATGAAAGATGCCAATGTTCGTGAAAATGATGTTGATCCTTCAAGAGTTAATGCTAGGAGATCTTCAAGGAATAAGCAGCATGTTTCATATGTGGAAACCTCTGAAGATGACGATTTTGAGATTCCTTCTAAAAAGCCACGGCATAATGGACCACTTAATGCCGATGAAGTTGAGAAACAGAACGTGCCTTCAAGTGGTGGGTCGTCCGTTAACAATATTCCAGCTACTTCAGCTGCTGGTGTGGCTGATCAGAACAGAGAGAAGGTATCCGAGTCAGATATTGGTCTTGGAACGTCAAAAGATGATAACTGCTCCCCATTGAATTCAGATGTTCCTTCTGGTCCAGGGATATTTCATTGTCCTGATTCAGATTTCAATGATTTTGAGAAGGATAAGGAGGAGCATTGTTTTGCTGTTAATCAGTTCTGGGCAATTTATGATACCACTGATGCGATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGGCCTCCCCTTTCCAGTTGAAGATTACTTGGTTGGAACCTGACCCAGATAACCAAGGTGAAATTGATTGGGATGATGCAGAATTGCCTATTGCTTGCGGTAAGTTCAGACTTGGTGATTCTCAGAAAACTACAGATCGTACTATGTTCTCTCATCAGGTGCGGTGCATAAAAGAAACTGGCAAAGGTTCTTATCTGGTATGTCCTAATAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCCAATCCAGAAAAACATTTGAAGTATGACTTCGAATATGTGGAAATCCTATCAGATTTTGCTGAGAATGTTGGCATCGCAGTTGCTTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGAAAACTGAGAAGAATGGAGTGAACATATTTTATGTCCGACCTAATGAACTATACAGGTTCTCACATCGAATTCCTTCTTATAAGATGACTGGTAATGAAAGGGAGGATGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCCTACTCATCTCTTTGAAGTTGGTGATTCGGGTAATGTGAAGATGTGA 2130 0.4197 MECNKDEALRVRQIAEARMQRGEFVEALKFATKAKRLYANVENIAQILTVCEVHIAAKKKLSASDLDWYAILQIERLADEATVKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGILTDQAKRSLYEFKFGAHVRGAAPKTSHSNGNAFAAKHNANATNNQKSSDSHHYSNGIVFAAKYDANATNYQKNSYPNSTGSNNQAGQMTFWTSCQHCNTRYQYCMLVVNATLRCQHCLKSFKAHVISLGYQGVSPSVFASVNTQKEAPMHGPPKPASARTGGKPLGGEHGGTFVQSNPTSMKKYAAGVGSHCEGAKSKDGYVPVSRGMDSQASKNVGSKRVRQSAPDSGESFKARNGDGMKDANVRENDVDPSRVNARRSSRNKQHVSYVETSEDDDFEIPSKKPRHNGPLNADEVEKQNVPSSGGSSVNNIPATSAAGVADQNREKVSESDIGLGTSKDDNCSPLNSDVPSGPGIFHCPDSDFNDFEKDKEEHCFAVNQFWAIYDTTDAMPRFYALVKKVASPFQLKITWLEPDPDNQGEIDWDDAELPIACGKFRLGDSQKTTDRTMFSHQVRCIKETGKGSYLVCPNKGETWAIFRDWDIKWSSNPEKHLKYDFEYVEILSDFAENVGIAVAYLGKVKGFVSLFQKTEKNGVNIFYVRPNELYRFSHRIPSYKMTGNEREDVPRGSFELDPAALPTHLFEVGDSGNVKM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01921 709 SMART dnaj_3 66 123 IPR001623 -
Pumo3g01921 709 Pfam DnaJ domain 67 128 IPR001623 -
Pumo3g01921 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo3g01921 709 MobiDBLite consensus disorder prediction 325 342 - -
Pumo3g01921 709 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 701 - -
Pumo3g01921 709 Gene3D DnaJ domain 53 153 IPR036869 -
Pumo3g01921 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo3g01921 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo3g01921 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo3g01921 709 CDD DnaJ 67 120 IPR001623 -
Pumo3g01921 709 Pfam Domain of unknown function (DUF3444) 474 678 IPR024593 -
Pumo3g01921 709 MobiDBLite consensus disorder prediction 351 410 - -
Pumo3g01921 709 MobiDBLite consensus disorder prediction 261 463 - -
Pumo3g01921 709 MobiDBLite consensus disorder prediction 414 435 - -
Pumo3g01921 709 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01921 Pumo-Chr3 30348949 30352050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01921 47 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 29.064 1.90e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01921 - - gmx:102662460 1141.72