Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01920 ATGGAGTGCAACAAAGATGAGGCTGTGAGGGCTAGGCAAATTGCCGAAGCTAGAATGCAAAGAGGTGAATTTGTGGAGGCACTCAAGTTTGCTACCAAGGCCAAAAAAATGTATGCTGATGTTGAAAACATTGCCCAGATTCTTACGGTTTGTGAGGTTCACATTGCTGCACAGAAAAAACTCTCCGACTCTGACATGGACTGGTATGCAATTCTTCAGATTGAAAGGTTGGCTGATGAGGCAGCTATTAAGAAACAGTACAGGAGGCTTGCACTGATACTTCATCCTGATAAGAATAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTCTTGAGTGACCAAGCAAAACGTTCCTTGTATGACATCAAGTTTGGATCCTCTGTAAGAGATGCTGCACCTAAGACCTCACACCATTACTCAAATGGGAATGTGTTTGCTGCAAACCATAATGCAAATGCAACAACAAATAATCAGAAGAGTTCTGATTCAGACCATTTCTCAAATGGGAATGTGTTTGCTGCAAAATATGATGCAAATGCAACGAATTATCCAAAGGATTCTTATCCAAACTCCACTGGTTCCAACAACCAAGCTGGACAGATGACATTCTGGACATCTTGCCAACATTGTAATACTAAGTTCCAGTGCCACATCCCATTTGTAAATGCAAACTTACTGTGTCAACAGTGTAACAAGCCATTTAAAGCTCATGTTATTAGTTTTGGATTCCAGGGTGTCTCGCCATCAGCATTTACTTCAGTAAATACCCAGGAAGAGGCTCCAATGCATGGTCCCCCAAAACCAGCCTCAGAAAATACTGGTGGAAAACCCCTTGGTAGAGAACATGCTGGTACATTTGTGCAGTCAAATCCTACATCTATGAAAAAATGTGCTGCTGGAGGTGCTAGTCACTGTGGAGGTGAAAAGAGTAAAGGTGGCAATATTCCTGCATCCAGAGGTATGGAGTCACAGACCACTAAAAATGTTGGAAGTAAAAGAGTAAGGCAGTCATCACCAGATGCAACAAATTATCAGAAGAATAATTCTCATTCACACCATTACTCAAATGGGAATGTGTTTGCTGCAAAACATGATGCAGATGCAGCAAATTATCAGACGAAGAATTCTGATTCACACCAGTACTCAAATGGGAATGTGTTCACCGCAAAACATGATGCAAATGCAACAAATTATCAGAAGAATTCTTACCCGAACACCACTGGTTCCAACAACCAAGCTAAACAGAAGACATTCTGGACATCTTGCCAACATTGTAATGCTAAGTATGAGTACTGCATCCCATTTGTAAATGCAACCTTACGCTGTCCACAGTGTTTGAATTCCTTTAAAGCTCGTGCTATTCCTTTGGTAAATATCCAGAAAGAACCAGCCTCAGAAAGTACTGGTGGAAAACCCCTCGGTGGAGAACATGCTGGTATGCGGTCAAATCCTATGTTTATGAAAAGATATGCTGCTGGAGTTGATGGCTATGTTCCTGCATCCAGAGACATGAACTCACAAACCTCTAAAATTGTTGGAAGTAAAAGAAAATGGTGA 1578 0.4163 MECNKDEAVRARQIAEARMQRGEFVEALKFATKAKKMYADVENIAQILTVCEVHIAAQKKLSDSDMDWYAILQIERLADEAAIKKQYRRLALILHPDKNKFAGAEAAFKLIGQANGVLSDQAKRSLYDIKFGSSVRDAAPKTSHHYSNGNVFAANHNANATTNNQKSSDSDHFSNGNVFAAKYDANATNYPKDSYPNSTGSNNQAGQMTFWTSCQHCNTKFQCHIPFVNANLLCQQCNKPFKAHVISFGFQGVSPSAFTSVNTQEEAPMHGPPKPASENTGGKPLGREHAGTFVQSNPTSMKKCAAGGASHCGGEKSKGGNIPASRGMESQTTKNVGSKRVRQSSPDATNYQKNNSHSHHYSNGNVFAAKHDADAANYQTKNSDSHQYSNGNVFTAKHDANATNYQKNSYPNTTGSNNQAKQKTFWTSCQHCNAKYEYCIPFVNATLRCPQCLNSFKARAIPLVNIQKEPASESTGGKPLGGEHAGMRSNPMFMKRYAAGVDGYVPASRDMNSQTSKIVGSKRKW 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01920 525 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo3g01920 525 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo3g01920 525 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo3g01920 525 CDD DnaJ 67 120 IPR001623 -
Pumo3g01920 525 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo3g01920 525 SMART dnaj_3 66 123 IPR001623 -
Pumo3g01920 525 SUPERFAMILY Chaperone J-domain 63 129 IPR036869 -
Pumo3g01920 525 Gene3D DnaJ domain 53 152 IPR036869 -
Pumo3g01920 525 Pfam DnaJ domain 67 128 IPR001623 -
Pumo3g01920 525 PANTHER BNAC03G44070D PROTEIN 417 470 - -
Pumo3g01920 525 MobiDBLite consensus disorder prediction 261 361 - -
Pumo3g01920 525 MobiDBLite consensus disorder prediction 324 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01920 Pumo-Chr3 30342779 30344691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01920 47 246 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 28.293 5.37e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01920 - - gmx:102662460 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01920 3 30342779 30344691 Pumo3g01920 3 30342779 30344691 ECH
Pumo5g03713 5 86776077 86781323 Pumo3g01920 3 30342779 30344691 PCT