Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01919 ATGGAGTGCAACAAGGACGAGGCTGTGAGGGCTAGACAAATTGCCGAAGCTAGAATGCAAAGAGGCGAATTTGTGGAGGCACTCAAGTTTGCTACCAAGGCCAAGAACTTGTATGCTGATGTTGAAAACATTACCCATGTTCTTACAATTTGTGAGGTTCACAATGCTGCACAGAAGAAACTCTCTGCCTCTGATTTGGACTGGTATGCAATTCTCCAGATTGAAGGGTTGGCTGATGAAGCAGCCATAAAAAAACAGTACAAGAGGCTTGCACTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGGTTGGGCAAGCCAATGGGGTCTTGAGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAAGTTTGGAGCCGCTGTGAGAGGTGTTGCAAAGAAATCCACTGCTTCCAAGAAGCAAGTTAGACAGAAAACATTCTGGACATGTTGCCTACACTGTAATGCTAAGTTCCAGTTCTGCATCCCATTTGTAAATGCAACCTTACGCTGTGTAAAGTGTTTTAAGCCCTTTAAAGCACGTGCTATTCCTTCGGTAAATATCCAGAAAGAGTCTCCAATGCATGGTCCCCCAAATCCAGTCTCAGAAAATACTGGTGGAGAACATGCTGGTACTTTTGCAAGGTCAAATCCTATGCCTATGAAAAAATGTTCTTATGGAGTTGGTGGTCATTGTGAAGGTGAAAAGAGTAAAGATGGCTATGTTCCTGCATCCAGAGGCATGGAGCCACAAACCTCTAAAAATGTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAAGCTGGTAATGGTGATGAGATGAAAGATGCTTGTGTTCGAGAAAATGATGTTGATCCTTCGAGACTTAATGAAGGGAGATCTTCCAGGCAAAAGAAGCATGTTTAA 945 0.4307 MECNKDEAVRARQIAEARMQRGEFVEALKFATKAKNLYADVENITHVLTICEVHNAAQKKLSASDLDWYAILQIEGLADEAAIKKQYKRLALLLHPDKNKFAGAEAAFKLVGQANGVLSDQAKRSLFDKKFGAAVRGVAKKSTASKKQVRQKTFWTCCLHCNAKFQFCIPFVNATLRCVKCFKPFKARAIPSVNIQKESPMHGPPNPVSENTGGEHAGTFARSNPMPMKKCSYGVGGHCEGEKSKDGYVPASRGMEPQTSKNVGSKRVRQSAPDSGESFKAGNGDEMKDACVRENDVDPSRLNEGRSSRQKKHV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01919 314 PANTHER BNAC03G44070D PROTEIN 1 267 - -
Pumo3g01919 314 SMART dnaj_3 66 123 IPR001623 -
Pumo3g01919 314 CDD DnaJ 67 120 IPR001623 -
Pumo3g01919 314 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pumo3g01919 314 MobiDBLite consensus disorder prediction 255 272 - -
Pumo3g01919 314 Pfam DnaJ domain 67 128 IPR001623 -
Pumo3g01919 314 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pumo3g01919 314 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pumo3g01919 314 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pumo3g01919 314 MobiDBLite consensus disorder prediction 281 307 - -
Pumo3g01919 314 Gene3D DnaJ domain 52 155 IPR036869 -
Pumo3g01919 314 MobiDBLite consensus disorder prediction 196 223 - -
Pumo3g01919 314 MobiDBLite consensus disorder prediction 244 314 - -
Pumo3g01919 314 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01919 Pumo-Chr3 30336007 30337782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01919 4 193 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.668 4.65e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01919 - - gsj:114370736 532.717