Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01914 ATGGTTTTTGAAATCAGTTCTGCTGTTTCAAAATTGCAAATGTTATCCACCTCAGACCATGCCTCCGTGGTCTCCATGAACTTATTTGTGGCACTTCTCTGTGGTTGTATTGTCCTTGGCCATCTTCTTGAGGAGAACCGGTGGATGAACGAGTCTATCACTGCCCTTTTGATTGGTCTTTCCACCGGCGTAGTCATTTTGCTGTTTAGTGGTGGTAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTTAACTTCATGACCATCACGTTATTTGGTGCTATTGGTACATTAATATCTTGTACCATCATAACTTTGGGTGCGACGGAAATTTTTAAGATGTTGGATGTTGGTCCAATGGAATTAGGGGATTACCTAGCAATTGGTGCAATATTTGCTGCGACGGATTCTGTTTGCACATTGCAGGTGCTAAATCAGGATGAGACACCTTTGCTGTACAGTCTTGTGTTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTCAACCAAATAGACCCTTCAATTGCTTTGCACTTTTTGGGCAATTTCTTGTATCTATTTATCGCAAGCACAATGCTTGGAGTGTTGACAGGTCTACTTAGTGCTTATATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGTTAATGGCATACCTATCCTACATGCTCGCTGAATTATGCTATCTAAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACCTGGCACAATGTGACTGAGAGTTCAAGAATCACTACCAAGCATTCTTTTGCAACCTTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTCGTCAGTGATAGCCCTGGAACATCTGTAGCAACCAGTTCAGTATTGTTGGGTCTAATTCTTCTTGGAAGAGCAGCTTTTGTTTTTCCCTTATCCTTCTTATCCAACTTGGCTAAAAAATCACCAAATGAGAAAATCAGCTTCAGACAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATTGCACTTGCATATAATCAGTTCACCATGTCGGGGCACACTTCACTGCGAAGCAATGCAATCATGATCACAAGCACCATCACTGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGCTTTTACTGCCTCAACCTAAAGGATCAAGCACCGCGATAACCACAGATCCATCTACTCCAAAATCAGTCATTGTCCCACTTCTTTCCCAAGAGTCTGAAGTTGATATTGATGGCCATGAAATTCATCGTCCAAGCAGCATTCGTGCTTTGCTCTCCACTCCAACACACACTGTTCATCGTTTGTGGCGTAAGTTTGATGATGCATTCATGCGTCCTGTTTTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCACCAAGTGAACGCAATGGTCATCAATGGCGTTGA 1620 0.4191 MVFEISSAVSKLQMLSTSDHASVVSMNLFVALLCGCIVLGHLLEENRWMNESITALLIGLSTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTITLFGAIGTLISCTIITLGATEIFKMLDVGPMELGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDPSIALHFLGNFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSVATSSVLLGLILLGRAAFVFPLSFLSNLAKKSPNEKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGHTSLRSNAIMITSTITVVLFSTVVFGLMTKPLIRLLLPQPKGSSTAITTDPSTPKSVIVPLLSQESEVDIDGHEIHRPSSIRALLSTPTHTVHRLWRKFDDAFMRPVFGGRGFVPVEPGSPSERNGHQWR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01914 539 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01914 539 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01914 539 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01914 539 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01914 539 NCBIfam sodium/hydrogen exchanger 3 27 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo3g01914 539 Gene3D - 146 197 - -
Pumo3g01914 539 PANTHER SODIUM/HYDROGEN EXCHANGER 16 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pumo3g01914 539 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01914 Pumo-Chr3 30257187 30263823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01914 6 537 Antiporters AT3G05030 77.323 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01914 - - gmx:732573 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01914 3 30257187 30263823 Pumo3g01914 3 30257187 30263823 ECH
Pumo5g03720 5 86886607 86890491 Pumo3g01914 3 30257187 30263823 PCT