Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01908 ATGCCTGTTCCTAACGGAGAAGAGCAGATTCTGTTACCTGAAAATGCAAGTGAGGTTTCAAAGTCACCCTCATTGGATTTGAACCCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGATGTCGGTGTCGTGCCAGAACACCAAAACAACGAGCTTGAGCACTTGATATCCAATTTAGAAAGAGAAATTGAGGAGCTGAGGCTCAAGCAGAAGAAATTGGATAAAAAGCGGAGAGAAGCATTGAGCAAGATATTGGACATCAAAGGGAGCATTCGGGTATTTTGTAGAATTCGACCGAATCTGGTAACGGAGAAGAGAAAAATGTCTGAACCAGTATCAGCTGGACCCGAGAAAATTCGGGTTAAGTTGGGGGGAACAAGGAAAGATTTTGAGTTTGACAAGGTTTTTCCTCAAGAAGCAAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGTGTTTTTGCCTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACGAACGAGCAGCCAGGAATTATTCCGCATGCTCTTGAAGAGCTCTTTCGTCAAGCCTCTTTGGATAATTCATCTTCTTTTACTTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGATCTGCTAGCTCCAAGACCCTCTGGTAGACCTCATGAACAACCTGTGACAAAATGCAATCTCAATATTCAAACAGATCCAAAGGGATTGATTGAAATTGAGGGTCTCTCAGAAGTGCAAATAAGTGATTATGCTAAAGCCAAATGGTGGTACAACAAGGGCAGACGGTTCAGATCCACGTCGTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAGCATATTTCGACGTGGGGATGCTTTGGAAGCTAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGGAGGCAGCGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCAGAGCCATTAATCTTTCTCTTTCAGCTTTAGCTGATGTTGTTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGGAATAGCAAGCTGACTCAAATACTGAAAGATTCTCTTGGGTATGGCTCAAAGGTCTTGATGCTCGTGCATATAAGCCCTTCTGAAGAGGATGTCTGTGAGACAATTTGTTCCTTGAACTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGCCAGTGGAAGTGAAGAAGCAAAGGGAGAAGAAGATTATGGAGCTAGAGGAAGACATCAAGGAAGCTGAAAAACAGCACCAGATTTTAAGGGAACAAATACAGAACATGGAGTTGAAGTTAAATGAGAGTAAAAAGCTCTTATCAACCGCATATAGTCTTGTGGAAAGTGATGACATGGCAACCTCAATTAGCCCCAAAGATGATGTCAAAGAGGTCATTGAAACCCCCAAATCATCTAAAAAGTCCATCAAAAGAAATTTCTCCAATTCAATGCCTCGATTCATGACTTCAACTGTTGCAAGTCGCCAAAGGCAAAGTGCTGCAGAACGAGACATTAGTACTGTGAGATTGAAAAGTTTTAGAACAATTGTCTCAAAAAGTTCCATCAACTTTTCATATTCCCAATCATTGAGTTATTCAGATATCCGCATCAAAGCAATACTGCGAAGTTCAAATGCAAAATCTCGGTATGCTGAAGCAGATAGGGTTCCAATTCCAAATACTGTTCTCACAGAAAAGCCTAAGTGCAATGATTTGGAACCAAGAGTCACAACTCCTCGAAGCAAGATGGTTACATCATCTGACCAAAACTTTAGAGTTTCATTGGGTCGTCACAGAAGAAGGATGTCTGATTTGATCTAA 1920 0.4214 MPVPNGEEQILLPENASEVSKSPSLDLNPDSVDGSPPVSTVYTDVGVVPEHQNNELEHLISNLEREIEELRLKQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVTEKRKMSEPVSAGPEKIRVKLGGTRKDFEFDKVFPQEASQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPHALEELFRQASLDNSSSFTFTMSMLEVYMGNLRDLLAPRPSGRPHEQPVTKCNLNIQTDPKGLIEIEGLSEVQISDYAKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDALEAKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRCHVPYRNSKLTQILKDSLGYGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPVEVKKQREKKIMELEEDIKEAEKQHQILREQIQNMELKLNESKKLLSTAYSLVESDDMATSISPKDDVKEVIETPKSSKKSIKRNFSNSMPRFMTSTVASRQRQSAAERDISTVRLKSFRTIVSKSSINFSYSQSLSYSDIRIKAILRSSNAKSRYAEADRVPIPNTVLTEKPKCNDLEPRVTTPRSKMVTSSDQNFRVSLGRHRRRMSDLI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01908 639 Coils Coil 431 472 - -
Pumo3g01908 639 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 48 422 - -
Pumo3g01908 639 ProSiteProfiles Kinesin motor domain profile. 94 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 MobiDBLite consensus disorder prediction 1 36 - -
Pumo3g01908 639 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 PRINTS Kinesin heavy chain signature 370 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 PRINTS Kinesin heavy chain signature 289 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 MobiDBLite consensus disorder prediction 15 36 - -
Pumo3g01908 639 Pfam Kinesin motor domain 122 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 PANTHER KINESIN-LIKE PROTEIN KLP-3 54 560 IPR027640 GO:0003777|GO:0007018
Pumo3g01908 639 SMART kinesin_4 92 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g01908 639 Coils Coil 53 87 - -
Pumo3g01908 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 462 IPR027417 -
Pumo3g01908 639 Gene3D Kinesin motor domain 89 466 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01908 Pumo-Chr3 30181572 30185840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01908 50 420 Calmodulin-binding Proteins AT5G65930 36.881 2.62e-69 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01908 - - gmx:100785581 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01908 3 30181572 30185840 Pumo3g01908 3 30181572 30185840 ECH