Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01907 ATGAGTGAGAGAGTGAAGAAAGAGAAGCAAACGGGGGAGAAAAGGGAGAGGATGAAGAACATCTTCAAGAAGCTTCACATAGGTAGCAGCCACGATCCTCATCGATCCAATGAGGTTTCGCCGCCCGTGCCGTCGCCGTCCTGCGCCGCCGATCAGTCTCAGAGCTCCGGCGCCACTCCGGCGAGTCCTTCGTCGGCGTCGGCTTCGGCGTCCGCGGTGGTGGTGACTCCCGGCGGCGGAGGCGGAGGCGGAGGCGGCGCCAGTCCGGTGGTGAATCGGCAGGACTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGCTAGCCCTAGCTATCAGCGCTTCCAATTCGGAGTTCCGCGATGATCCTGAGAAGGATCAGATCCACACGGCGACGCTGTTGAGCTTGGGAGGCCATCGAATCGATTCGACGAGGAACAAGGACGATGTGGCGGAGGCGCTGTCGCGGCAGTACTGGGAATATAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCCCTATAATGATTCAGTAATGCAAGGAAAGATGCCATCTCGAACAGATCTTGAAGCAAACCCTGGAGGTTCTGAGGTGGTCATTGTTAATCGAGCAATTGATCCTGCTCTGGAAGAACTGATACAAATTGCACAATGTATTGCGTTAGACTGCCCTGTCACTAGTTTGGTACAAAGGCTTGCTGAACTTGTTACAAGTCATATGGGTGGTCCTGTAAAGGATGCAAGTATTATGTTAGCAAGATGGACAGAAACAAGAGCAGAGTTAAGAACATCTCTTCACACAATTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTAGCTGACAACATTAATATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTGGAGGATGATGCTGTCAACATTATAAAGTTGGAGGGTGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCAGGGACACTTATCCCAGCTGATATTTTAAGCACCAAGGATAGTGCCTTTAAGTCTTACAATCCCAAGATTTTGCCAAGTTTACCCTCCACTAAGGATGATGAATTTTCTTACTCAAGACCTACCCAACCATCTCATGGTGAAGGTAGTAGTCAAAATTCTGTGATAAAAGATTATTCACTGCCCTGGAATGGAAAATCATATTTTGAGAAGTCAGAGCCTTCAAACTTAGGTTTGAGTAGAGACAGTGGCGTTGGTCCTTCTAAAATTCCAAATAGAGGGACTCCTAACCAACTAGAAAATTTGCCAGCCTTGTCTGGTGCTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATACTAATAACAGCCCCAATGACTCTCGGAGCCTTTTTGCAGATCTTAACCCATTCCAAATAAAAGGAATGGGGAAGGCCTCTGTGCATAACAAACCTGTGGAAAATAAATCTCCTGAGCTTAAAAGTACTAAAAACAATACTGTTTCTGGTCGACCCCCAGTGCCACTGATGTGGAAGAATCGTCATGTTTACAATGAAGACCCCAGGAAAACTAATCATAACCCTAATGAATACAATCCTCCCTTATTTGTTTCCAATGGTTCTTCTACATCTGAGAATATTGACCTTAGTAGTTCCAAACCATTATATAATTCAAATATAAATAATGATGTAAATGCTCAAACTTCGGCGCAAGTTACTGGTTCAGTTTCACCACCTTCTGTACCTAAACTGAACCAGATTGAGGATCTCAATGCTGATTTTAACCAGGGGGGTTTGGAAGATTCTCAATACGTCATGGTAGAGGCGGTTAGAGAATCTGAAAATGTTGAAATCAGACATCATGACCAGAGGAAGTGTACATATGACAGATTCATGGGAAGCAATTTGAAATTAAAAGATCCAGAGAGTCCTAGCTCATCAATTGATTCCATCACAAACAGGGTTGATCAAATATTGGATGATGTTGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGATCTTGGTGAAAGAATTGGTATAGGTTCATATGGCGAGGTATACCATGCCGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCTGCATTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTACGTCATCCAAATATTGTTCTTTTTATGGGTGCTGTTACTCGTCCTCCCAATCTGTCAATCATTTCAGAGTATCTACCAAGAGGAAGCTTGTACCGACTTCTTCATCGCCCTAATTGTCAGATCGATGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACACCAGCACACCTACAATTGTTCACCGAGATCTAAAGTCTCCCAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGTGATTTTGGGCTGTCACGGTTGAAGCACAACACTTTTTTGTCATCCAAGTCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAACCCTCAAATGAGAAATGCGATGTTTATAGTTTTGGAGTCATCCTATGGGAGCTTGCCACTCTAAGGTTGCCGTGGAGTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTTGGTTTCCAACACCGTAGACTTGATATTCCTAAGGAAGTTGATCCTATAGTTGCAAGTATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGGCCCTCGTTTGCACAACTCACAGTGGCTTTAAAGCCTCTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACCTGTGCCGCAGGAGATTTCTGTAAATTCCACCCCATGA 2922 0.4473 MSERVKKEKQTGEKRERMKNIFKKLHIGSSHDPHRSNEVSPPVPSPSCAADQSQSSGATPASPSSASASASAVVVTPGGGGGGGGGASPVVNRQDFFSSEEEFQVQLALAISASNSEFRDDPEKDQIHTATLLSLGGHRIDSTRNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGPYNDSVMQGKMPSRTDLEANPGGSEVVIVNRAIDPALEELIQIAQCIALDCPVTSLVQRLAELVTSHMGGPVKDASIMLARWTETRAELRTSLHTIVLPLGSLNIGLSRHRALLFKVLADNINMPCRLVKGSHYTGVEDDAVNIIKLEGEREFLVDLMAAPGTLIPADILSTKDSAFKSYNPKILPSLPSTKDDEFSYSRPTQPSHGEGSSQNSVIKDYSLPWNGKSYFEKSEPSNLGLSRDSGVGPSKIPNRGTPNQLENLPALSGASLYKGTLGMNTVGDGTRLNVNVVPYTNNSPNDSRSLFADLNPFQIKGMGKASVHNKPVENKSPELKSTKNNTVSGRPPVPLMWKNRHVYNEDPRKTNHNPNEYNPPLFVSNGSSTSENIDLSSSKPLYNSNINNDVNAQTSAQVTGSVSPPSVPKLNQIEDLNADFNQGGLEDSQYVMVEAVRESENVEIRHHDQRKCTYDRFMGSNLKLKDPESPSSSIDSITNRVDQILDDVDVGECEIPWEDLDLGERIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEYLPRGSLYRLLHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQHRRLDIPKEVDPIVASIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPPVPQEISVNSTP 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01907 973 FunFam Serine/threonine-protein kinase CTR1 771 954 - -
Pumo3g01907 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Pumo3g01907 973 CDD STKc_MAP3K-like 698 941 - -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 1 33 - -
Pumo3g01907 973 ProSitePatterns Protein kinases ATP-binding region signature. 698 720 IPR017441 GO:0005524
Pumo3g01907 973 MobiDBLite consensus disorder prediction 41 67 - -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 369 394 - -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 496 527 - -
Pumo3g01907 973 Gene3D Transferase(Phosphotransferase) domain 1 771 953 - -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 370 394 - -
Pumo3g01907 973 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 73 948 - -
Pumo3g01907 973 Pfam Protein tyrosine and serine/threonine kinase 693 942 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 Pfam Ethylene-responsive protein kinase Le-CTR1 150 343 - -
Pumo3g01907 973 ProSiteProfiles Protein kinase domain profile. 692 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01907 973 FunFam Serine/threonine-protein kinase isoform 1 683 770 - -
Pumo3g01907 973 Gene3D Phosphorylase Kinase; domain 1 685 769 - -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 1 67 - -
Pumo3g01907 973 SUPERFAMILY Protein kinase-like (PK-like) 682 964 IPR011009 -
Pumo3g01907 973 MobiDBLite consensus disorder prediction 410 439 - -
Pumo3g01907 973 PRINTS Tyrosine kinase catalytic domain signature 766 779 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 PRINTS Tyrosine kinase catalytic domain signature 915 937 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 PRINTS Tyrosine kinase catalytic domain signature 871 893 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 PRINTS Tyrosine kinase catalytic domain signature 805 823 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 PRINTS Tyrosine kinase catalytic domain signature 852 862 IPR001245 GO:0004672|GO:0006468
Pumo3g01907 973 SMART serkin_6 692 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01907 Pumo-Chr3 30169978 30179391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01907 18 928 MAP Kinase Kinase Kinase AT1G08720 55.426 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pumo3g01907 PK_Tyr_Ser-Thr 4.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01907 - - gmx:100818780 1801.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01907 3 30169978 30179391 Pumo3g01907 3 30169978 30179391 ECH
Pumo3g01907 3 30169978 30179391 Pumo5g02939 5 76934808 76936654 PCT