Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01903 ATGGGTTTTTCTCACGACTTGGAGTTGGAATCCTCTTCTCCCCCTCTTGTCTTTTCAGTTCGGAGGAGAGAACCGGAGCTGGTGGCACCGGCGAAGCCCACTCCCCGCGAAATCAAGGCCCTATCCGAGATAGACTCTCAAGCGGGTCTGCGTACTCAAATTCCAATCATACAGTTCTACCGTAACGACCCATCGATGGCAGGGAAGGACCCGGTTCAAGCCATTAGAAGCGCTCTCGCGGAAACACTTGTTTTCTACTACCCGATTGCAGGTAGACTCAAGGAAGGTTCAGATGGGAAACTCTTTGTGGATTGTAACGAAGAGGGTGTCATGTTCATCGAGGCCGATGCTGATGTCACGCTTGATCAGTTCGGTGATGCTCTGAAACCTCCGTTCCCTTGCTTCCAAGAACTCCTTTACCAACCTCCCGGTTCAGAAGGAGTCACTGATACCCCCATTTTTCTTATACAGGTGACGCGTTTGAAGTGCGGTGGTTTCATCTTCGCGCTCCGTTTCAACCACGCCATGACCGACGGAGTTGGCCTCATCCACTTCACACTCACCATGGCCGGGATAGCACGAGGAGCCACGCAGGAACCTCCATTTCAACCCGTGTGGAGCAGGGAGCTTCTGTGGGCCAGGGATCCGCCACGTGTCACCTTCAACCACCACGAGTACGAACAGCTCACGGACTCCAACGACGCCGTTCCGACCGACTTCGAGCAGCGCTCGTTCTTCTTCGGCCCCGCCGAAATCGCCGCCATCCGCGCCCTGCTCCCCGGCGACCTCGACCAGCACGCCACAACGTTCGAGGTGCTGACGTCATACGTCTGGCGCTGCCGCACGAAAGCGCTTCAGATCGATCCGAAGGAAGATGTGCGAATGATGTGCATCGTGGACGCGCGCGGCAAGTTCGATCCGCCTTTCCCGGCGGGGTTCTACGGCAGCTGCTTTGGGTTTCCGGCGGCGGTGACCGCCGCCGGCGAGCTCTGCGAGAAGCCGCTGGAGTACGCGGTGAGGTTGATACAGAAAGCGAGTGGAGAGGTGAGCGAGGAGTATATTCATTCGGTGACGGATCTGATGGCGACTGAGGGAAGGCCGTTATTTACTGTGGTGAGGTCGTGTCTGGTGTTGGATACGACGCAGGCTGGGTTTAGAAATTTGGACTTCGGTTGGGGGAAGGCGCTGTATGGAGGAATGGCTATTGCTGGTGCAGGGGCTTTCCCTGCGGTGAACTTTCATGTGCCGAGTCAGAATGCTAAGGGAGAGGAAGGTCTTTTGGTTTTGGTTTGCTTGCCTAGCCAAGTCATGAAAGCGTTTGCCAAAGAGTTGGATGACAATATGCTTCAGACCAACAAAGCATAA 1365 0.556 MGFSHDLELESSSPPLVFSVRRREPELVAPAKPTPREIKALSEIDSQAGLRTQIPIIQFYRNDPSMAGKDPVQAIRSALAETLVFYYPIAGRLKEGSDGKLFVDCNEEGVMFIEADADVTLDQFGDALKPPFPCFQELLYQPPGSEGVTDTPIFLIQVTRLKCGGFIFALRFNHAMTDGVGLIHFTLTMAGIARGATQEPPFQPVWSRELLWARDPPRVTFNHHEYEQLTDSNDAVPTDFEQRSFFFGPAEIAAIRALLPGDLDQHATTFEVLTSYVWRCRTKALQIDPKEDVRMMCIVDARGKFDPPFPAGFYGSCFGFPAAVTAAGELCEKPLEYAVRLIQKASGEVSEEYIHSVTDLMATEGRPLFTVVRSCLVLDTTQAGFRNLDFGWGKALYGGMAIAGAGAFPAVNFHVPSQNAKGEEGLLVLVCLPSQVMKAFAKELDDNMLQTNKA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01903 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 445 - -
Pumo3g01903 454 Gene3D - 224 444 IPR023213 -
Pumo3g01903 454 Gene3D - 17 223 IPR023213 -
Pumo3g01903 454 Pfam Transferase family 19 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01903 Pumo-Chr3 30101494 30104185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01903 20 444 Monolignol Biosynthesis Gene Families AT5G48930 29.932 3.78e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01903 K19861 - gmx:100820325 824.313