Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01897 ATGGCATCCGATCTAAACGACGCCGTTTTCCCCGAAGAAGATCTCGACGACGACGACGAGACTCCAGAGGACGAAGAGGACGACGATGACGTTTTAGACGACGATGTTCTAGACGACGACGAAACCGAACCCCCTCCCTCCGTCCTCGCCGCCGTAGCGCCCGCTTCCGCCGCCTCCGAAACGCTCGACACCGAGTCGATTCCGATCGCCGCCGTCGCGGATTCCTCGCCGAAACCGCCGCGCACGGAGCAAATCGAGGAGAAGAAAGCGCTGGACGATTCGCGGCGACTGTTCCAGCGTCTGTGGACGGACGAGGACGAGATCGGGCTCCTGCAGGGGTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCTCTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGCTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCCTCAACAAAATCAGCTCCGGCAAGGAATTCTCCTTCAAGAGCCCTCACGACCGAGCCACCTTCGAAATCTCGCGCAGGATCTGGAGCAACACCGCTCCAATCACCAGTCCCGTCGAAGACGACGACGAAATCAACCCTAACCCTAATTTCGGCAATTCGGCGAAGACGCCGCTGTCGCGGAAGCGGTCGCGGCCTCGTTCGGAGAAGCGCGAGTTGAACGACGGTTCAACGTTGAATAGAGATAATAATTGTATTGGCAATAATAATAATAGCAATAGTAATAATAATAATAATGAGAATTGTAATAGTAGGCATAACTTACAGGGTTTGGTTGAAGAGACGGTGAGGAGTTGCGTTTCGCCGGTGTTGAAGGAGTTGGTGTGTGGTGGCGTGGGATTGGGAAGAGGGTTTGGGGTTGGAGGAGGGTTGGCATTGAATCCTTTGCAAATGCAAATGCAAATGCAAATGCCATTGAGTTTATTGAAGTTGGGGATTGGGGAAACGGCGATGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAACTGGAAGTGTATTCCAAGCGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTTTAGAGGAGTTGCGTTCAGCTGGAGGAGGATGA 1119 0.5317 MASDLNDAVFPEEDLDDDDETPEDEEDDDDVLDDDVLDDDETEPPPSVLAAVAPASAASETLDTESIPIAAVADSSPKPPRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLNKISSGKEFSFKSPHDRATFEISRRIWSNTAPITSPVEDDDEINPNPNFGNSAKTPLSRKRSRPRSEKRELNDGSTLNRDNNCIGNNNNSNSNNNNNENCNSRHNLQGLVEETVRSCVSPVLKELVCGGVGLGRGFGVGGGLALNPLQMQMQMQMPLSLLKLGIGETAMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSAGGG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01897 372 MobiDBLite consensus disorder prediction 1 84 - -
Pumo3g01897 372 Pfam Protein of unknown function, DUF573 98 192 IPR007592 GO:0006355
Pumo3g01897 372 MobiDBLite consensus disorder prediction 197 263 - -
Pumo3g01897 372 PANTHER BNAANNG10740D PROTEIN-RELATED 11 365 IPR007592 GO:0006355
Pumo3g01897 372 MobiDBLite consensus disorder prediction 240 263 - -
Pumo3g01897 372 MobiDBLite consensus disorder prediction 9 42 - -
Pumo3g01897 372 Coils Coil 146 166 - -
Pumo3g01897 372 Coils Coil 338 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01897 Pumo-Chr3 30046378 30047996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01897 12 372 GeBP Transcription Factor Family AT5G28040 45.025 7.92e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pumo3g01897 DUF573 1.4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01897 - - gmx:100817182 481.87