Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01884 ATGGCGGATTCTTCAACCAACTCAAAGGACCATCACAACACGCGCGTCTACCACCCCTACCAGGACCTCAACGTTCCCATCCAGAAGCTCTACAACCTCCCCACCGCGCCGGAGCACCTCTTCCCCGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCTCCGGCTACCTCGCCGGCGCCGTAATTGGAGCCTCCAGGGGCACCCTCCAGGGCCTCCGCGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGACTCAACCGAGTCCTCAACTCGGGGGGCCACGCGGGTCGCAGACTCGGCAACTCGCTCGGCGTGGTTGGCCTCATCTTCGCGGGCCTCGAGAGTGGGATGATCCATTTTAGAGGCACCGATGACTTCGTCAACAGCGCCGTCGCCGGACTCGGCACCGGAGCGCTCTACAGGGCCGCCGCCGGACCCCGATCCGCCGCTATTGCCGGCGCCATCGGCGGAATCGCCGCGGCCGCCGCGGTTGCCGGGAAGCAAGCTTTGAAGAGATACGTGCCGATCTAG 555 0.6559 MADSSTNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGAVIGASRGTLQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLESGMIHFRGTDDFVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVAGKQALKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01884 184 PANTHER TIM23 26 172 IPR045238 GO:0022857
Pumo3g01884 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01884 Pumo-Chr3 29924830 29925793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01884 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 57.778 3.45e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01884 K17794 - gmx:100779163 311.227