Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01861 ATGACATCACGCGTTTTCACCTCCGAAGCAACCTACAAGTTCCCTGTTAAACCCGACAAACGTTACTGGCTCAGACTCCATTTCTACCCCGCCGTTTACAACACCTTCGACCCTGCCAATTCATATTTCTCTGTCACAGCAAACAGCATTACGCTTCTTTCCAATTTCAGCGCGTCAATCACGTGCCAAGCCCTCTCACAAGCCTACCTCGACAGAGAGTATTCCCTCGCACCTTTGGATTCGGACACTCTCACTCTTACCTTCAAGCCCTCTGAGAAACAGAACGGAGCTTTCGCTTTTGTTAATGGGATTCAACTTATTGAAATGCCGGAGTTGTTTGATTCGGCTCCTTTGGTGGGGTACTCTGACCAAACCATGGATACAAAAAGTTTGCATTTTCAGACAATGTTCAGATTAAACGTTGGTGGACAATTTATACCTCCGAAACAAGATTCTGGGCTAAGCAGAATGTGGTATGATGATACACCTTATTTATATGGTGCTGCCACTGGTGTCACCAACCAAGCTAACAAGGATGTCAAAATTAACTACAAAACCATGCCACAGTACATTGCTCCTACTAATGTGTACGCCACTTCAAGATCCATGGGGAACAATAAGGACGTCAACATGGGATTCAATCTCACGTGGATATTTCAAGTTGATCCAGGTTCCATGTACCTTACAAGATTGCATTTCTGTGACTATTACTATTCCAAAGTGAATGAAATTGTTTTCAAAATCTTCATCAACAATCAAACGGCGGAGGCTGAAGCTGATGTGATTGGGTGGACTGGAGGTAAAGGAGTGCCAACTTACAAGGATTATGTGATATATGTGAAAGATGAGCCAGGTGATGATCAACTATGGCTTGGTTTGCACCCTGCACCTGAAACAAAGCCTGAATTTTATGATTCATTACTCAATGGGGTGGAGGTCTTCAAACTCAATGACACAAACTTGTCTGGCGCTAATCCTCAACCTTCTGAGATGTTGGTTGAACATGAGGTGCAGGCAAAGACTTTCCAAAACAAACATGGTAATAATAAGACTTTTGTTATTGGCAGTGCTGCTGGGGGTGCTGCAGGTTTTGCCTTAGTGGCTGCAATAATTGTTGTTGTTCAACACCAAAAGAAAAATAGAGCTCCGGGATCATACAGCACATCAAGCTGGCTACCTATTTATGGGAATTCGCACACCGCAGGCACCAAATCCACAGGTTCAGGGAAGAGTGTTGGTAGTGCCAACTTATCAGCCATGGCTCAAGGACTGTGCCGTTATTTTTCCTTACAAGAGATGAAGCAAGCGACCAAGAATTTTGATGAGTCCAATGTGATAGGGGTAGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGGTTCAAGGTGGCAATCAAAAGAGCGAACCCGCAGTCAGACCAAGGAGTGAACGAGTTCCAGACTGAGATTGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGATGATGAGATGTGTCTGGTTTATGACTACATGGCTCGTGGCACCATGAGGGAGCACCTTTACAAGGGAAACAAGCCATTGGACACTCTTTCATGGAAGCAAAGGTTGGAGATCTGCATAGGAGCTGCGAGAGGCCTTCACTACCTTCACACGGGGGCAAAATACACCATCATTCATAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAATTGGGTTGCCAAGGTTTCAGATTTTGGACTGTCCAAAACGGGTCCAAACATGAACCAAGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAATCAGATGTGTACTCATTTGGGGTTGTTCTGTTTGAGGCACTTTGTTCAAGGCCTGCTCTCAATCCTAGCCTTCCAAAGGAACAGGTAAGCCTTGCAGAATGGGCATTGTACAACAAAAGAAGAGGAACGCTTGAGGACATCATTGACCCTAACATCAAAGGACAGATCAACCCTGAAAGCTTGAACAAGTTTGCTGATGCGGCTGAGAAGTGTGTGTCTGACCTTGGATTCGAACGCCCCTCCATGAATGATCTCTTATGGAATCTCGAATTTGCTCTCAATGTGCAACAAAACCCCGATGGTTCAACTGCTCCACGTCTTGATGAAAGTGAGTTTGAAGAAGTAAACTTGGAAAAGAATGACATGGCAGCTCACTACAAAAACCTTAGCCTTGGAAGTGTGCATGAGCTTAGCCACGAATCCAGTAGTGATATCTTCTCACAAATTGCCGATCCAAAAGGACGATGA 2337 0.4437 MTSRVFTSEATYKFPVKPDKRYWLRLHFYPAVYNTFDPANSYFSVTANSITLLSNFSASITCQALSQAYLDREYSLAPLDSDTLTLTFKPSEKQNGAFAFVNGIQLIEMPELFDSAPLVGYSDQTMDTKSLHFQTMFRLNVGGQFIPPKQDSGLSRMWYDDTPYLYGAATGVTNQANKDVKINYKTMPQYIAPTNVYATSRSMGNNKDVNMGFNLTWIFQVDPGSMYLTRLHFCDYYYSKVNEIVFKIFINNQTAEAEADVIGWTGGKGVPTYKDYVIYVKDEPGDDQLWLGLHPAPETKPEFYDSLLNGVEVFKLNDTNLSGANPQPSEMLVEHEVQAKTFQNKHGNNKTFVIGSAAGGAAGFALVAAIIVVVQHQKKNRAPGSYSTSSWLPIYGNSHTAGTKSTGSGKSVGSANLSAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRANPQSDQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMARGTMREHLYKGNKPLDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLAEWALYNKRRGTLEDIIDPNIKGQINPESLNKFADAAEKCVSDLGFERPSMNDLLWNLEFALNVQQNPDGSTAPRLDESEFEEVNLEKNDMAAHYKNLSLGSVHELSHESSSDIFSQIADPKGR 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01861 778 PANTHER OS07G0166700 PROTEIN 424 719 IPR045272 GO:0004714|GO:0006468
Pumo3g01861 778 FunFam FERONIA receptor-like kinase 1 110 - -
Pumo3g01861 778 Gene3D Transferase(Phosphotransferase) domain 1 516 730 - -
Pumo3g01861 778 FunFam FERONIA receptor-like kinase 131 317 - -
Pumo3g01861 778 FunFam receptor-like protein kinase FERONIA 403 515 - -
Pumo3g01861 778 Pfam Malectin-like domain 2 315 IPR024788 -
Pumo3g01861 778 Gene3D Phosphorylase Kinase; domain 1 412 515 - -
Pumo3g01861 778 ProSitePatterns Protein kinases ATP-binding region signature. 446 468 IPR017441 GO:0005524
Pumo3g01861 778 Gene3D - 131 316 - -
Pumo3g01861 778 Gene3D - 1 110 - -
Pumo3g01861 778 SMART serkin_6 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01861 778 SUPERFAMILY Protein kinase-like (PK-like) 417 715 IPR011009 -
Pumo3g01861 778 ProSiteProfiles Protein kinase domain profile. 440 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01861 778 Pfam Protein tyrosine and serine/threonine kinase 444 641 IPR001245 GO:0004672|GO:0006468
Pumo3g01861 778 CDD STKc_IRAK 446 713 - -
Pumo3g01861 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Pumo3g01861 778 FunFam Receptor-like protein kinase FERONIA 516 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01861 Pumo-Chr3 29693548 29695884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01861 1 778 Receptor kinase-like Gene Family AT3G51550 54.110 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo3g01861 Malectin_like 1.4e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01861 - - gmx:100791236 1450.65