Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01849 ATGAAAAATGCAACAAGGTTAAGAGGAACCAACACAAAGAGAACAACCACCAAAATGCAAACCAACCTGCTGTTCTTCTATTGTTACATTGGCCTCTCACTTGTTTTTGCTGAGACTGCAGCAGATGATGAATTGTCAACTCTGCTCTCAATCAAGTCCACTCTCATTGACCCAATGAAGCATCTGAAGGACTGGCAACTACCAAGCAATGTGACACAGGAAGGTTCTCCTCATTGTAACTGGACTGGAGTTGGTTGCAACTCTAAAGGCTTTGTAGAGAGCCTAGACCTCTCCAACATGAATCTTAGCGGTCGCGTTTCGGACCACATTCAATCTCTTTCAAGTCTGTCTTCTTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAATCACTGTCCAACCTCACCTCTCTCAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGTTGCAGGCTTGAGATCAATTAATGCATCAAGCAATGAATTTTCGGGTTTTCTTCCCGAGGATATTGGAAATGCAACATTGCTCGAGAGCCTTGACTTTCGAGGGAGCTACTTTATGAGTCCAATCCCCAGGAGTTTTAAGAATTTGCAGAAACTCAAGTTTCTAGGCCTTTCAGGCAATAACTTCACAGGGAGGATTCCAGGATATCTTGGGGAACTCACTTCTCTGGAGACATTGATTATAGGATACAATTTGTTTGAAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAGTCTTCAATACCTTGACTTGGCTGTAGGCAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTGACAAAACTCACCACAATTTATTTGTACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTACTTCACTAGAATTTTTGGACCTCTCTGACAATCAGATCTCAGGAGAGATTCCAGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAATCTGATGACCAACAAACTAACTGGTCCAGTACCAGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTATGGAAAAATTCTTTACATGGTCCTTTGCCACCAAACCTTGGACAGAACTCTCCTTTGCAGTGGTTGGATGTATCCTCTAACTCACTATCCGGGGATATCCCTCCAGGTTTGTGTACTACAGGAAATCTCACTAAACTAATTCTCTTTAATAATTCCTTCACTGGTTCCATTCCAAGTGGACTTGCAAACTGTTTGTCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGAAGCCTCCTTGGCCTTCAACGGCTGGAGTTGGCAAAGAACAACCTCACTGGGAAAATTCCCACAGATATTACCTCATCCACATCACTCTCTTTTATTGATGTATCTTGGAACCACCTTGAGTCATCTCTACCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAGTTTTGTAGGAAATATCCCAGATGAGTTCCAGGATTGTCCATCTCTCTCTGTGCTGGATCTTTCAAACACCCATATATCTGGCACAATCCCTGAAAGCATTGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTCGAAATAACCTCTTGACAGGAGAAATCCCAAAATCAATCACAAACATGCCCACCTTATCTGTTCTTGATCTGTCCAACAATTCACTGACTGGTAGGATACCTGAAAATTTTGGCAACTCCCCAGCTCTGGAAATGCTGAACCTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGTTGGTGACCATAAATCCTAATGATCTTATCGGCAATGAGGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAGTTTGGCTGTGACAAGCCATCGAAGGAGCTCACATGCCAGACACATCATTATTGGTTTTGTGACTGGCATTTCAGTGATTTTAGCTATTGGTGCAGTATATTTTGGTGGTAGATGTTTATACAAGAGATGGCACTTGTATAACAATTTCATGCATGATTGGTTCAAGCAGAGCAATGAGGATTGGCCCTGGAGGTTAGTAGCATTCCAGAGGATCAGTTTCACTAGTAGTGACATCCTTGCATGCATAAAGGAATCAAATGTCATAGGCATGGGGGGCGCTGGTATTGTCTATAAAGCTGAAATCCATAGACCTCACGTAACCGTAGCAGTGAAGAAACTATGGAGGTCACGGACGGACATAGAAGATGGCAGTGATATGTTGAGAGAAGTGGAACTCCTCGGGAGACTCAGGCACAGGAATATTGTGAGGCTGTTGGGGTATGTACACAATGAAAGGGATGTGATCATGGTTTACGAGTACATGCCTAACGGGAATCTTGGAACAGCACTGCATGGTGAGCAATCTGCAAGGTTGCTTGTTGACTGGGTTTCAAGGTACAACATAGCTCTTGGTGTTGCACAAGGGCTTAACTACCTCCACCATGATTGCCACCCACCAGTAATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCAAGAATAGCAGATTTCGGGTTGGCAAGGATGATGATTCAAAAGAATGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATTGCACCAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTACGGAGTGGTACTTTTGGAGCTCCTAACTGGCAAAATGCCTTTAGACCCTTCGTTTGAAGAATCAATTGACATAGTCGAATGGATAAGGAAGAAGAAAAACAACAAAGCTTTGTTAGAAGCACTGGATCCTGCTATAGCTAGTCAGTGCAAACATGTCCAAGAAGAAATGCTGCTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGGCACGACAACAGTAGCGTGGAAAAGTCAACGATATTTACCACTTCCCCAGTAGTCAGTCTTTTGTAG 3102 0.432 MKNATRLRGTNTKRTTTKMQTNLLFFYCYIGLSLVFAETAADDELSTLLSIKSTLIDPMKHLKDWQLPSNVTQEGSPHCNWTGVGCNSKGFVESLDLSNMNLSGRVSDHIQSLSSLSSFNISCNNFASSLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGRVAGLRSINASSNEFSGFLPEDIGNATLLESLDFRGSYFMSPIPRSFKNLQKLKFLGLSGNNFTGRIPGYLGELTSLETLIIGYNLFEGEIPAEFGNLTSLQYLDLAVGSLSGQIPAELGKLTKLTTIYLYHNNFTGKIPPQLGNITSLEFLDLSDNQISGEIPEELAKLENLKLLNLMTNKLTGPVPEKLGELKNLQVLELWKNSLHGPLPPNLGQNSPLQWLDVSSNSLSGDIPPGLCTTGNLTKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGSLLGLQRLELAKNNLTGKIPTDITSSTSLSFIDVSWNHLESSLPSDILSIPTLQTFIASHNSFVGNIPDEFQDCPSLSVLDLSNTHISGTIPESIASCQKLVNLNLRNNLLTGEIPKSITNMPTLSVLDLSNNSLTGRIPENFGNSPALEMLNLSYNKLEGPVPSNGMLVTINPNDLIGNEGLCGGILPPCSPSLAVTSHRRSSHARHIIIGFVTGISVILAIGAVYFGGRCLYKRWHLYNNFMHDWFKQSNEDWPWRLVAFQRISFTSSDILACIKESNVIGMGGAGIVYKAEIHRPHVTVAVKKLWRSRTDIEDGSDMLREVELLGRLRHRNIVRLLGYVHNERDVIMVYEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPSFEESIDIVEWIRKKKNNKALLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPPMRDIITMLGEAKPRRKSVCHNGGHDNSSVEKSTIFTTSPVVSLL 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01849 1033 FunFam MDIS1-interacting receptor like kinase 1 806 1015 - -
Pumo3g01849 1033 SUPERFAMILY RNI-like 94 439 - -
Pumo3g01849 1033 FunFam MDIS1-interacting receptor like kinase 1 723 805 - -
Pumo3g01849 1033 Pfam Protein kinase domain 725 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01849 1033 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 41 196 - -
Pumo3g01849 1033 SMART serkin_6 723 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01849 1033 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 197 297 - -
Pumo3g01849 1033 Gene3D Ribonuclease Inhibitor 349 643 IPR032675 -
Pumo3g01849 1033 PRINTS Leucine-rich repeat signature 308 321 - -
Pumo3g01849 1033 PRINTS Leucine-rich repeat signature 569 582 - -
Pumo3g01849 1033 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 188 992 - -
Pumo3g01849 1033 SUPERFAMILY Protein kinase-like (PK-like) 719 997 IPR011009 -
Pumo3g01849 1033 Pfam Leucine rich repeat N-terminal domain 41 87 IPR013210 -
Pumo3g01849 1033 Gene3D Ribonuclease Inhibitor 253 348 IPR032675 -
Pumo3g01849 1033 Gene3D Transferase(Phosphotransferase) domain 1 806 1022 - -
Pumo3g01849 1033 ProSiteProfiles Leucine-rich repeat profile. 307 330 IPR001611 GO:0005515
Pumo3g01849 1033 Gene3D Ribonuclease Inhibitor 163 252 IPR032675 -
Pumo3g01849 1033 SUPERFAMILY L domain-like 380 632 - -
Pumo3g01849 1033 Gene3D Ribonuclease Inhibitor 43 162 IPR032675 -
Pumo3g01849 1033 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Pumo3g01849 1033 Pfam Leucine rich repeat 428 486 IPR001611 GO:0005515
Pumo3g01849 1033 SMART LRR_typ_2 353 377 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 113 137 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 449 473 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 569 592 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 209 233 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 281 304 IPR003591 -
Pumo3g01849 1033 SMART LRR_typ_2 305 329 IPR003591 -
Pumo3g01849 1033 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 380 642 - -
Pumo3g01849 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Pumo3g01849 1033 ProSiteProfiles Protein kinase domain profile. 723 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01849 1033 Gene3D Phosphorylase Kinase; domain 1 723 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01849 Pumo-Chr3 29539365 29542949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01849 23 1033 Receptor kinase-like Gene Family AT1G08590 65.116 0.0 1315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo3g01849 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01849 - - gmx:100793873 1880.53