Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01836 ATGTCTGATAGAATAGCTAGAGAAAAAGCGGAAGAAGAGGCAAGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAACGGGAACTTCCTAGGCCTCCTACTGCATCATTGGAGCTTATAAGAAATTCCTTGATGAGAACTGATGGTGACAAGAGTTCCTTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATTAGAAGGGAGCTTCTAACTTTATTGGAGCATGACAATACTAAGTATCCACTTGATGAGAAAGTGAATAAGGAGAAAAAGAAAGGAGCCAAGCGTGCCGTAAATGGGTCTGTTGTCCCTGAGATAGAAGATTTTCAGGAAGATGAAATGAAAGAGGCTGATAAGTTGATAAAGGAAGAGGCCCAGTATCTTTGTGCAGCAATGGGACATGAAGATGAACCCCTTGATGAATTTATTGAAGCACACAGAACCTGTCTCAATGATCTTATGTACTTTCCTACCCGTAATGCATATGGTCTCTCTAGTGTTGCTGGAAACATGGAAAAGCTAGCAGCTCTGCAGAATGAATTTGAGAATGTGAGAAACAAATTGGATGATGGTAAGGAGAAGATGATACGGCTTGAGAAGAAGGTGATGGTTCTCACACAAGGCTATGAGATGAGAGTAAAGAAAAGCCTCTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGACGTAGCTGCAACTGAGTTAGAATGCTTTAAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCATCGCATAGGATAAACAATCTGTGGGCTGAAGTACAAAAGCAAAAGGAACTTGAGAAAACTTTGCAAAATAGGTATGGGAGTCTAATTGAAGAGCTGGAAAAAATGCAAAATGTCATGGACCAATGCAGATTACAAGCACAACAGCAAAAAGAAATTGAAGCAAACAACCATGCTTTTGAGTCAACTGAGACCACTGAGACCACTGAGACCAAGCCTAATGAAACTGATGCACAGGGTACAGAAAATTGTGAAGCTGTACCTCACTCGGTGGAGCATGGACGTGCTCTAGCAGTTGAGTCATCTCATGATGGAACTGCTGACCAGCAAGTAGATATTGTGCAAGACCAGGCTACTTCTGGCCCCAGTCATGATATGGATGTGGATTCTGATAAATTGGCAAATCCTACACCAGCTGCAGAGAATGTCGATGAAAAGGTGGAAGGTACTGGTACTGACAATGGTGAGACCATACTAGAAATGGGTGCTGCAGTAAGTAGCCCCAATCATGATGTAGTTGCGGATGCTGTAAACTCACGTGATAACAGCATGGAAGAAACCAATGCTGTTGGGGAGGAGACAATTTAG 1344 0.4271 MSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRTDGDKSSFVPPTSIEQADEMIRRELLTLLEHDNTKYPLDEKVNKEKKKGAKRAVNGSVVPEIEDFQEDEMKEADKLIKEEAQYLCAAMGHEDEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRNKLDDGKEKMIRLEKKVMVLTQGYEMRVKKSLWPQIEATFKQMDVAATELECFKALQKQEQLAASHRINNLWAEVQKQKELEKTLQNRYGSLIEELEKMQNVMDQCRLQAQQQKEIEANNHAFESTETTETTETKPNETDAQGTENCEAVPHSVEHGRALAVESSHDGTADQQVDIVQDQATSGPSHDMDVDSDKLANPTPAAENVDEKVEGTGTDNGETILEMGAAVSSPNHDVVADAVNSRDNSMEETNAVGEETI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01836 447 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 292 IPR047242 GO:0000398|GO:0000974
Pumo3g01836 447 MobiDBLite consensus disorder prediction 369 407 - -
Pumo3g01836 447 Coils Coil 271 305 - -
Pumo3g01836 447 MobiDBLite consensus disorder prediction 307 335 - -
Pumo3g01836 447 Pfam pre-mRNA splicing factor component 1 143 IPR021786 -
Pumo3g01836 447 Coils Coil 171 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01836 1 313 MYB-Related Transcription Factor Family AT1G09770 59.365 2.29e-120 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01836 K12860 - gmx:100790369 753.821