Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01813 ATGGCTTCTCTCTCTTGCTCCGCCAACGACCTTGCCCCACTCTTCAACGACACCGCCGCCGCCAACTACCTCTGCGCCCAATTCAATTCCATTTCGAAGAAGCTCGCCGACACAACCTACGCCGTCGACAACACCTACCTTCTGTTTTCAGCGTATTTGGTTTTTGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCAGAGCCAAGAACACAATGAACATCATGCTCACCAACGTCCTCGACGCTGCTGCCGGCGGCTTGTCCTACTACCTCTTCGGCTTCGCATTCGCCTTCGGCGCACCCTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAGGGATTACCCTATTCCCTCCAGGCGACTACAGCTTCTTCCTCTACCAGTGGTCCTTCGCCATCGCCGCCGCCGGAATTACCAGCGGCTCCATCGCCGAGAGAACACAGTTCGTGGCTTACCTTATCTACTCATCTTTCCTAACCGCGCGTCTCGAAGCGACGGAAATGTTTTATTCGGGTCTGGAGTCATCGACTTTGCGGGCTCAGGCGTTGTTCACATGGTTGGCGGGATAGCGGGCCTGTGGGGGGCTTTAATTGAAGGCCCCAGAATCGGCCGGTTCGACCGGACGGGCCGGTCCGTGGCTTTACGTGGCCACAGCGCGTCTTTAGTTGTGCTTGGTTCGTTTTTGTTATGGTTCGGGTGGTATGGCTTCAACCCTGGTTCGTTTCTGACTATAGCGAAGGGGTACGGGAGGGAAGGGTATTATGGTCAATGGAGCGCGATAGGGAGGACAGCTGTCACGACGACATTGGCTGGGAGCACCGCTGCTCTGACGACACTGTTCAGCAAGCGGTTATTGGTGGGCCACTGGAACGTGATTGACGTGTGTAACGGCCTGCTTGGCGGGTTCGCTGCTATCACCTCGGGCTGCGCGGTTGTGGAACCGTGGGCCGCGATTGTGTGTGGGCTTGTGGCGGCGTGGGTTTTGATTGTGCTTAATAAGCTGGCGGCGAAGGTGGAGTACGATGATCCGTTGGAGGCGGCGCAGCTTCACGGGGGGTGCGGCGCTTGGGGAGTGTTGTTCACGGGTTTGTTTGCGAAGGGAGAGTTCGTGGAGGAGATTTATGGAGTTGGAAGGCCGTTCGGGGCTTTGATGGGTGGCGGTGGGAGGCTGTTGGCGGCGCAGGTGATTCAGGTATTGGTGGTATGTGGGTGGGTTACGGCGACTATGGCGCCGTTGTTCTATGGGCTTCATAAGATGAATCTGTTGAGGATATCGAGGGATGATGAGACTGCGGGGATGGACTTGACGAGGCATGGCGGGTTTGCTTATGCATATCATGATGATGAAGATGGTTCCAGCAAGGGAATAGGATTCATGATGCGTAAAATTGAGCCTGCTAGTACGACTCCCTCTCCCCCCGCTGCACCACAAGTGTGA 1452 0.5689 MASLSCSANDLAPLFNDTAAANYLCAQFNSISKKLADTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPIPSRRLQLLPLPVVLRHRRRRNYQRLHRRENTVRGLPYLLIFPNRASRSDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKGYGREGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGLVAAWVLIVLNKLAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKGEFVEEIYGVGRPFGALMGGGGRLLAAQVIQVLVVCGWVTATMAPLFYGLHKMNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSKGIGFMMRKIEPASTTPSPPAAPQV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01813 483 SUPERFAMILY Ammonium transporter 40 429 - -
Pumo3g01813 483 ProSitePatterns Ammonium transporters signature. 181 206 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pumo3g01813 483 Gene3D Ammonium transporter AmtB like domains 160 465 IPR029020 -
Pumo3g01813 483 Gene3D Ammonium transporter AmtB like domains 21 128 IPR029020 -
Pumo3g01813 483 Pfam Ammonium Transporter Family 177 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo3g01813 483 Pfam Ammonium Transporter Family 46 118 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pumo3g01813 483 PANTHER AMMONIUM TRANSPORTER 175 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01813 Pumo-Chr3 29150923 29152429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01813 22 477 Inorganic Solute Cotransporters AT1G64780 70.417 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01813 K03320 K07573 gmx:100797209 756.518