Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01803 ATGAATTGCTTCCCTTGTTGTGGCCCTAAAAAAAGCAATAGCAAGAGGGAGCATGGTTCTCCACCTCCGGAACCTGTTACAGTAGCAAAAACACCAGATATGAAGAAACAAAAACCAGACGAGCAAATCCAAGTTGACATTGCAAATATTAAGGCACGGGCTTTCACTTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGTCAGGATTGCCTGTTGGATGAAGGAGGTTTCGGCAGATTATACAAAGGGATCATTCCTGCCACCGGCCAGGTTGTGGCCGTGAAGCAACTCGACCGAAATGGGATGCAAAGCAGTAAGGAATTTCTGGTTGATGTTTCGGAGCTAAGTCTCTTGCACCACGAAAATCTGGTCAATCTCATTGGTTATTGTGCTGATGGGGATCAACGTCTTTTGGTCTACGAGTTATTTGCTGGGCGCACTCTAGAAAACCGTCTTTTTGAGAATAAAGCGGATGAAGGTCCATTAAGTTGGTTTGACAGAATGAAAATAGTAGCGGGTGCTTCTAAAGGACTAGAGTACTTGCATGACACTGCGAACCCTCCGATTATATTCCGGGACTTGAAAGAGTCGAGCATTTTGGTGGACAATGATCTCCATGTTAAACTATGTGACGTTGGCATGGCCAAGCTTTCTGGTGGAGACAGGATGAACAATGGACCTCCGAGACTTATGGGTACCTATGGTCACTGTGCTCCGGAGTATGTAAGAGCAGGTCAATGCACCATGAAATCAGACGTATACAGTTTCGGAGTTGTCTTGCTAGAGCTCATAACTGGACGAAGAGCCATTGACACCACCAGGCCAAACGAAGAGCAAAATCTAGTTCAATGGGCAACACCCTTATTCAGGGATCCCAAGAGATATCCAGACATGGCAGATCCACTTCTTAATAAGAATTTCCCAGAAAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCTCGTCCTTTGATCAGCGACGTTGTAACTGCTCTCAGTTTTCTTTCCGCGCCCCCTGCGACTGTCCCCAGAAAGAGTAGCGCTGCTGAAAGCGAAAGGGGAAGCGAAAGTGAGAGCGAAAGCGAGAGTGGAAGTGAAGCAGCATCTAGCAAGGGGAGCCGTAGATCCTCAGTGGATGAAAGCCAACTTCCACCAGTGGTTTCCTCTAAACCCAGCCGCAAGAGCAGCTCCAGATCAAAGAAGGGAGCACTTTCAGATTCAGGAGATGGAAGCGTTTCTTCCAGCAGCAAGAGCAGTAGGAAGTCTCACGGTATTTTAAGCCACAAGAGCAGCAGAAAATCTTCAGAGAAAGATTTAAGCCAGAAGAGCAGCAAGAAATCTTCTGCAGAAGATTTAAGCCAGAAGAGCAGCAGAAAATCTTCCGTGGAAGATTTAACCCATAAGAGCAGCAAAAAATCCTCTGCGGAAGATTTAAGCCAGAAGAGCAGCAAAAAGTCTTCTTCTACCAAAGAGTTAAGCCAGAAGAGCAGCAAAAAATCTTCCATAAAAAAAAAGAGCAGTAGAAAATCTTCTGGGAGAGTTTTGAGCCACAAGAGCAGCATGGAATCAGAGAATGGAAGCATTTCCTCAAGCTGCCGTAGCAGCAGTGTGGCATCAGAGGATGAAGAGGTTCGGTCAGAGCGTAGCAGCATGAGGCTATCACAAGGGAGTTTTCACTCAGACACCTATAGCAGCAAAAGGACAGACGATGAGAGCATGCATTTATTAGACCGTGCAACCAGCATGGGATCTGATGAGGGAAGTGGTCAACCTTTTGACCAAACTAGCAGCAGTGGATCAAGTGTTTATTCGCGATAA 1845 0.4602 MNCFPCCGPKKSNSKREHGSPPPEPVTVAKTPDMKKQKPDEQIQVDIANIKARAFTFRELATATKNFRQDCLLDEGGFGRLYKGIIPATGQVVAVKQLDRNGMQSSKEFLVDVSELSLLHHENLVNLIGYCADGDQRLLVYELFAGRTLENRLFENKADEGPLSWFDRMKIVAGASKGLEYLHDTANPPIIFRDLKESSILVDNDLHVKLCDVGMAKLSGGDRMNNGPPRLMGTYGHCAPEYVRAGQCTMKSDVYSFGVVLLELITGRRAIDTTRPNEEQNLVQWATPLFRDPKRYPDMADPLLNKNFPEKDLNQVVAIASMCLQEEAEARPLISDVVTALSFLSAPPATVPRKSSAAESERGSESESESESGSEAASSKGSRRSSVDESQLPPVVSSKPSRKSSSRSKKGALSDSGDGSVSSSSKSSRKSHGILSHKSSRKSSEKDLSQKSSKKSSAEDLSQKSSRKSSVEDLTHKSSKKSSAEDLSQKSSKKSSSTKELSQKSSKKSSIKKKSSRKSSGRVLSHKSSMESENGSISSSCRSSSVASEDEEVRSERSSMRLSQGSFHSDTYSSKRTDDESMHLLDRATSMGSDEGSGQPFDQTSSSGSSVYSR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01803 614 PANTHER OS07G0668900 PROTEIN 3 353 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 410 430 - -
Pumo3g01803 614 SUPERFAMILY Protein kinase-like (PK-like) 46 344 IPR011009 -
Pumo3g01803 614 Gene3D Phosphorylase Kinase; domain 1 28 143 - -
Pumo3g01803 614 FunFam Serine/threonine-protein kinase PBS1 144 360 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 370 402 - -
Pumo3g01803 614 Pfam Protein kinase domain 73 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01803 614 Gene3D Transferase(Phosphotransferase) domain 1 145 345 - -
Pumo3g01803 614 FunFam probable serine/threonine-protein kinase RLCKVII 39 143 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 438 488 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 489 504 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 592 614 - -
Pumo3g01803 614 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01803 614 MobiDBLite consensus disorder prediction 522 546 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 348 614 - -
Pumo3g01803 614 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01803 Pumo-Chr3 29033277 29036293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01803 1 348 Glycoside Hydrolase AT3G07070 58.082 5.58e-147 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo3g01803 Pkinase 3.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01803 - - gmx:100804526 827.009