Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01792 ATGGAGCCTCACTTCGTGGTTCCACTTCCATTGATGTTTCTAATCACCCTTTGGGTTTTACTATCTCTCCATGCCAATGCTGAAAGTTCCACATATATAGTTCACATGGACAAGTCCCTCATGCCTCAGGTTTTTGCAAGCCATCAAGATTGGTATGAATCCACCATTCATTCCATAAACTTAGCAACAGCTGATGATCCATCTGAGCAACAATCATTAGTGTACACATACGATGATGCCATGCATGGATTCAGTGCAGTGCTATCATCAGAGGAGTTGGAGACCCTAAAGAACACTCATGGTTTTGTCACAGCTTACCCTGATAGATCTGCCACCATAGACACCACACACACCTTTGAGTTTCTCTCTTTGAACCCCTCCAATGGCCTATGGAATGCTTCAAATTTTGGAGAGGGTGTCATTGTGGGTCTTATTGACTCAGGTATCTGGCCCGAAAGTGAGAGTTTCAAAGATGATGGCATGAGCAGGAACATCCCATCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTTAACACCTCCATGTGTAACTTCAAGTTGATTGGAGCAAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCCAAGATCACAATCAGAATGAACTCAGCGAGAGACACTCATGGTCATGGGAGCCACACATCATCCACTGTTGCTGGCAACTATGTTAATGGTGCTTCTTTCTTTGGCTACGCCAAAGGGGTAGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGACGAGGGGCGTCAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATCTCTTTGGGTTTTGATAGTGTTCCACTTTATGAGGATCCGGTGGCAATAGCTGCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCCTCAGCAGGAAACGAAGGTCCTACACTTGGTACCTTGCACAACGGAATCCCTTGGGTCTTAACCGTTGCAGCAGGCACCATAGACCGCACATTTGGAAGTTTGACACTGGGAAATGGCAAAACCATTGTGGGTTGGACCTTGTTTGCAGCAAACGCCATAGTGGAAAATTATCCACTTATTTACAACAAGACTGTATCAGCATGCAACTCGGTTAAACTATTAACCGAAGTAGCCGCGAAAGGGATCATTATATGTGATGCCTTGGACTCAGTTTCTGTTTTTACCCAAATAGATTCTATTACTGCGGCCAGTGTGGATGGGGCTGTGTTTATCTCTGAGGATCCAGAACTAATTGAAACAGGACGTTTGTTCTCTCCAAGCATTGTAATCAGCCCAAATGATGCACCATCCGTGATCAAGTACGCGAAAAGTGCTCAAATACCCTTTGCCAGCATCAAATTTCAACAAACATTTGTGGGAATAAAGCCAGCACCAGCTGCTGCATATTACACTTCAAGAGGTCCTTCACCAAGCTACCCGGGGATCTTGAAGCCTGATGTAATGGCACCTGGCTCCAATGTTCTGGCTGCTTTTGTTCCAAATAAACCTTCAGCTAGAATTGGTTCAAACGTGTTTTTGTCAAGTGACTACAATTTCTTGTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTTTTGAAAGCAGCACACCCTGATTGGAGTGCAGCTGCTATAAGATCTGCATTGGTTACAACTGCTAATCCCCTTGATAATACACAGAATCCAATTAGGGATAATGGCAACCCATTGCAATATGCTTCTCCTCTTGCCATGGGAGCTGGTGAAATTGATCCTAATAGAGCACTTGATCCTGGTCTCATATATGATGCCACCCCACAGGACTATGTTAACCTCCTTTGTGCTTTGGGATACACACACAACCAAATCTTAACCATCACAAGATCAAAGTCCTATAACTGTCCTGCTAACCCGTCATCTGATCTTAACTACCCTTCGTTTATAGTTTTGTACAGTAACAAAACAAGATCAACAGTCCAAGAGTTTAGGAGGACCGTGACCAATGTTGGAGATGGTGCTGCTACATACAAAGTCAAGGTGACACAACCCAAGGGTTCTGTTGTTAAGGTGTCGCCTGAGACATTGGCATTTGGCTATAAGAATGAGAAGCAGAGCTACTCTGTTACTATAAAGTACACCAGGAACAAGAAGGAAAGCATCTCATTCGGAGACATTGGTTGGGTTGAAGATGGTGGTGCACGCACCGGTTAG 2250 0.4502 MEPHFVVPLPLMFLITLWVLLSLHANAESSTYIVHMDKSLMPQVFASHQDWYESTIHSINLATADDPSEQQSLVYTYDDAMHGFSAVLSSEELETLKNTHGFVTAYPDRSATIDTTHTFEFLSLNPSNGLWNASNFGEGVIVGLIDSGIWPESESFKDDGMSRNIPSKWKGTCEPGQDFNTSMCNFKLIGARYFNKGVKAANPKITIRMNSARDTHGHGSHTSSTVAGNYVNGASFFGYAKGVARGIAPRARLAMYKVLWDEGRQASDVLAGMDQAIADGVDVISISLGFDSVPLYEDPVAIAAFAAMEKGVVVSSSAGNEGPTLGTLHNGIPWVLTVAAGTIDRTFGSLTLGNGKTIVGWTLFAANAIVENYPLIYNKTVSACNSVKLLTEVAAKGIIICDALDSVSVFTQIDSITAASVDGAVFISEDPELIETGRLFSPSIVISPNDAPSVIKYAKSAQIPFASIKFQQTFVGIKPAPAAAYYTSRGPSPSYPGILKPDVMAPGSNVLAAFVPNKPSARIGSNVFLSSDYNFLSGTSMACPHASGVAALLKAAHPDWSAAAIRSALVTTANPLDNTQNPIRDNGNPLQYASPLAMGAGEIDPNRALDPGLIYDATPQDYVNLLCALGYTHNQILTITRSKSYNCPANPSSDLNYPSFIVLYSNKTRSTVQEFRRTVTNVGDGAATYKVKVTQPKGSVVKVSPETLAFGYKNEKQSYSVTIKYTRNKKESISFGDIGWVEDGGARTG 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01792 749 Gene3D Peptidase S8/S53 domain 139 622 IPR036852 GO:0004252|GO:0006508
Pumo3g01792 749 FunFam Subtilisin-like protease SBT1.5 139 351 - -
Pumo3g01792 749 Gene3D - 626 747 - -
Pumo3g01792 749 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Pumo3g01792 749 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Pumo3g01792 749 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Pumo3g01792 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 740 IPR045051 -
Pumo3g01792 749 CDD Peptidases_S8_3 112 574 IPR034197 -
Pumo3g01792 749 CDD PA_subtilisin_like 349 468 - -
Pumo3g01792 749 Gene3D - 344 475 - -
Pumo3g01792 749 Pfam Subtilase family 137 578 IPR000209 GO:0006508|GO:0008236
Pumo3g01792 749 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Pumo3g01792 749 SUPERFAMILY Subtilisin-like 114 613 IPR036852 GO:0004252|GO:0006508
Pumo3g01792 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Pumo3g01792 749 FunFam Subtilisin-like protease SBT1.9 21 114 - -
Pumo3g01792 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Pumo3g01792 749 ProSiteProfiles Serine proteases, subtilase domain profile. 118 609 - -
Pumo3g01792 749 Pfam Fibronectin type-III domain 654 742 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01792 Pumo-Chr3 28926593 28928842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01792 27 747 Subtilisin-like Serine Gene Family AT5G67090 41.328 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01792 - - gmx:100806072 1403.65