Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01781 ATGGTGGGATTGGTGATAGAAGACGAAGATGAAGTTGTGATTGCTCCAACGAACTTTTCAATGGTTGAGGAGGGGATTTATCGCTCCAGTTTCCCTCGATCTTCAAATTTCTCCTTTATCGAAACTCTGAATCTTCGATCCATCGTATACTTGTGCCCCGAATCCTATCCACAGGAAAATCTAGAGTTTCTTGAATCTCAAAATATTCGGCTCTTTCACTTTGGTATTGAAGGCAAAACGGATCTCTCTGTGCCTGCCGTTAGGGATACAATCTTGGAGGCTGTCAAAGTTTTGATTGATGTGAGAAATCACCCAGTTTTGATCCACTGCAATCAAGGAAAGCACCGAACTGGTTGCGTTGTTGGTTGCTTGAGGAAATTTCAGGGTTGGTGCTTATCTTCTGTGTTTGATGAGTACAAGCGATTTGCTGGTGCTAAATCCAGGAAAACAGATTTAAGGTTCATAGAAACAGTTGACGTGTCAAGCCTGAGACAGTGTCTCAAAAGCATCATATACCAGTACCTAGGCTATGCTTCAAAGAAGCTGCGGTTGCTGTATACAGATGAGAATTCACTCAAAGCTCCAGTTAACATCAGTTTAGCTCTTTAA 609 0.4204 MVGLVIEDEDEVVIAPTNFSMVEEGIYRSSFPRSSNFSFIETLNLRSIVYLCPESYPQENLEFLESQNIRLFHFGIEGKTDLSVPAVRDTILEAVKVLIDVRNHPVLIHCNQGKHRTGCVVGCLRKFQGWCLSSVFDEYKRFAGAKSRKTDLRFIETVDVSSLRQCLKSIIYQYLGYASKKLRLLYTDENSLKAPVNISLAL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01781 202 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Pumo3g01781 202 FunFam probable tyrosine-protein phosphatase At1g05000 12 162 - -
Pumo3g01781 202 CDD PFA-DSP_Siw14 13 159 - -
Pumo3g01781 202 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 156 IPR029021 -
Pumo3g01781 202 Pfam Tyrosine phosphatase family 13 164 IPR004861 -
Pumo3g01781 202 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 173 - -
Pumo3g01781 202 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Pumo3g01781 202 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Pumo3g01781 202 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Pumo3g01781 202 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Pumo3g01781 202 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 121 IPR000387 GO:0016311|GO:0016791
Pumo3g01781 202 Gene3D Protein tyrosine phosphatase superfamily 13 162 IPR029021 -
Pumo3g01781 202 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 172 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01781 Pumo-Chr3 28840420 28841987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01781 4 195 Protein tyrosine phosphatase (PTP) family AT3G02800 64.103 1.47e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01781 K18045 - gmx:100808199 338.961