Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01774 ATGAAGACACTCACGGGGAACCGTTTCGGTGATGACTGCAGATACTTGTGCCCCGAATCCTATCCACAGGAAAATCTAGAGTTTCTTGAATCGCAAAATATTCGGCTCTTTCACTTTGGTATTGAAGGCAAAACGGATCTCTCTGTGCCTGCCGTTAGGGATACAATCTTGGAGGCTGTCAAAGTTTTGATTGATGTGAGAAATCACCCAGTTTTGATCCACTGCAATCAAGGAAAGCACCGAACTGGTTGCGTTGTTGGTTGCTTGAGGAAATTTCAGGGTTGGTGCTTATCTTCTGTGTTTGATGAGTACAAGCGATTTGCTGGTGCTAAATCCAGGAAAACAGATTTAATGTTCATAGAAACAGTTGACGTATCAAGCCTGAGGCAGTGTCTCAAAGCATCATATACCAGTACCTAG 420 0.4357 MKTLTGNRFGDDCRYLCPESYPQENLEFLESQNIRLFHFGIEGKTDLSVPAVRDTILEAVKVLIDVRNHPVLIHCNQGKHRTGCVVGCLRKFQGWCLSSVFDEYKRFAGAKSRKTDLMFIETVDVSSLRQCLKASYTST 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01774 139 FunFam Tyrosine phosphatase, putative 12 126 - -
Pumo3g01774 139 Pfam Tyrosine phosphatase family 15 128 IPR004861 -
Pumo3g01774 139 ProSitePatterns Tyrosine specific protein phosphatases active site. 73 83 IPR016130 GO:0016311|GO:0016791
Pumo3g01774 139 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 54 86 IPR000387 GO:0016311|GO:0016791
Pumo3g01774 139 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 132 - -
Pumo3g01774 139 Gene3D Protein tyrosine phosphatase superfamily 12 127 IPR029021 -
Pumo3g01774 139 PRINTS Plant and fungal dual specificity phosphatase signature 34 48 IPR020428 GO:0016791
Pumo3g01774 139 PRINTS Plant and fungal dual specificity phosphatase signature 51 65 IPR020428 GO:0016791
Pumo3g01774 139 PRINTS Plant and fungal dual specificity phosphatase signature 15 28 IPR020428 GO:0016791
Pumo3g01774 139 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 120 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01774 Pumo-Chr3 28297853 28299122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01774 15 132 Protein tyrosine phosphatase (PTP) family AT3G02800 67.797 1.51e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01774 K18045 - gmx:100808199 222.246