Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01759 ATGGACAGCAGCACGGATTCGAATGATGTACCCATGGGCGGCGGGTCGGACTCAGTTGGACCCTATCCACACGAATCGGATCCAAATCCAAATCCAAATGTCAAATACTCCCATTCATTTTCACCTTCGCCATTTCCGTCTGTGTCCCCTGCTGCTACTGAGAGCGGAGATTCTGCAACGTATCCTCTCATCTCCCCCACTCCGAACCAATCACAAGAGCCTCACCGTCTCAACTCGCTCGCAATTTCCTTGCCCTCAATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCCGACCCGCCGGACGAGTGGGTGGACGGGTCCTGGACGGTGGACTGCATCTGCGGCGTGACCTTCGACGACGGCGAGGAGATGGTGAAATGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGCGCTACGTGAAGGGCGACGACACCTTCGCCTGCGACAAGTGCAAGGCCCGCCACAACAGCACCAACCCCGAGGAGACCGAGGTCGCGCAGTTCCTCGTGGAGCTCCCCACGAAAACCATCTCCATGGACAACAAAAAGGCCCTCCCCTCCAGGCCCAGGCTCTGGACCGATAAGCCCATGGAGGAGCGGGTCCACGTCCAGGGCCCACCCGGCGGGGACCCTTCCATCTTCGCCGGCAGGAGTGCCTCCTCGATTTTCACGCCCCAGCTCTGGAAGGCCTGCGGGTATGTCCCCAAGAAGTTTAATTTTCAGTATAAGGAGTTCCCTTTCAATAATGACGAGGCTGCGCCAGCACAAGATAATGGGGCTGGGGCTGGGGCTCTTGTTTCTCTGTCTAAAGAGACTGATAATACTGCTCCTGTGCTGGACTCTTCCCCTGTTGAGCCTTTGGTTGAAACGAGATCTGGTCACCTCAAGGACGCAGATACGGGCAAGTTTGGCAGCGAGGACGTGGCGCCACGTGTTCCCACTGACGTGAAGAAGGAGAGGACTCTGCTCAGGCTTCCTGCTGTACATAATAACAGTAAGCGCAGCAAGATGGATTTTGGGACTTCGAATTCCAAGGACAGGAGTGGGAAGAAGCGTGTTAGGACTTCTGATAGAGAGGCAGATCCCCGGAAGAGAACGCTGCATTCTTCTAAAACAGTGCTTACGCCCACCGCTGATGGAAAGCAATTGGACTTTTATGAGGACAGAGGATTGAAGATTTTCAAGGCTGACACTCGGAGCATAAAGAATAAAAACTTAAAAGACATAGTGGTTCAAGAATATGTTTCTGATGATTATGTAGCTGTGGATACTATCATGGAGGAGCCAAATAACAACTTAACAACTACCGAGGACTCTTCAGAACCATTATATCCTGACATGACCAGACATGGTGTTTCTGTTGGAGATGTAGTAGCAGAAGAGAAGACTAGCCATAAAGCTCCTACTGTGGTGGAGATGTCTTCTAAGACTGATGATGCTGTTACATCGGCTTTAAAGCAGAATTGTGTTGGAAATGCTTCGGTTAAAGAAAAGGATGGAGATTGCTTGGTCGCTGATAATGCAGATGATACTTTAGTAGTAAAAAGCGCTGCAAGTCCTCACACAGAAGGTCATTGTGGTTCTGCACCAGAACTTGTGGATAACCAAGTTTCTCAGGAGGATCTTGACCGTAACATGCGTCCTAGCTCTACAAAATGCAAAGTTAAGGTGAAGAGAGATGACGATGTTGATAATTTTAGGAAGCCCTCAAATTTTCATTCTTCTCCTATCAGTGATCTTAAAAACAATGAAAAACCATCTGATCACACAACTGATATTGTTAAAGTGAATGATGCTCCGGTACCCAGTTTACCATCATGTGAAAATAAGGTGGGTGGGGTTGACATTTCATCAGAAGTAATCCCTGCTGATCATACCAATAAACCCAATGAATTATCTGGTGATTTTTGTCATAGAAAACAAGAACTGGAGGGGTCTGAAGATTCCTTGGAAACACAAAAGGGATTTTCAGAAACAAAAGACGGTTCAGATGCTGCTAAAGATCCATCAAAATCTGAAGCAATTGGATGTCCACCTAAAGTTGGAAAGTCATCTCCAACTTCATCAACCATGAACTCCAAATCATTGGGTCACGACATCAAATCTGAAGATACTGAAATCCCTAATTCTCTTACGAAGCATGGAGTGATGGCTGATATGCACATAAAGAATGAAAATTGTCCAAGTAATGCGGCCAGGGATGAAAATCCAAAGAAGTCTGTGAAAGAGCGACCAAAATCCTCTTTGAATTCGAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCAAAATTCTGTCTCAAAGCAAGTGAATTCAGATGCAAGAGATTCTGTTCATGTTTCGTCTTCTAAATCTTTGATACATCAGACTGCAAGTATTCTAGGCTCTAGTGAGCCTAATGCTTCATTGCACCATCAGAAGGTTATACAAGTGCAGAATAAGATTTCATCTTCAGCGCCACAGAAAGTTGAAAAACCTAACCAAACAAACATCCACACTTCCTCTAAGTTGAACCAAAGTCATTTGCCAACAGTGAATCCTTCTCCAATATCAAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTCTGCTATTGCATCAAGAACTAAATAGTTCTCCTCGTGTACCTCGTGTACCCCGAGCACGCCATGCGGGTAGTTTGCCCCAATTGACTTCTGCTAGTGCTACAAGCATGCTAATGAAGCGAACATCGGGTGGAGGAAAGGATCATTATTTGGTATCTAGACGAAAACACAAGGATGCATCTAGAGATGGGTCCGGCAGTTCTCGTGAACTTGAAGATGAAGCCAAAAGGATAGAGAAGGAGAAGGGTCCATCCTCCTCTGATCAGAGGAAACAAGATATGTCTTATGTGGAAGATGCTACTGCAAGGGAAGAAGGCCTTGCATCTATGACAGCAGCAAACCCCATCACAAACAATACTGTTTCTTCCACCTCTGCAATTGCAAACAGTGATCCATCCTCCCCTCCTGAGGATCAGAACTTGTCATCTATGCGTACCTCACCTAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCACCGCACCTTACCTGGTTTAATCAATGACATTATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTGCCGCACTGGCATAACTTGAGGAAGCATAATGGAGAGCGTTATGCATACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGCTGGATGCTGAAGAGTCTGATGATAATGGATATAGCAAGGGAAGAACTGCGAAAGATGCTGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTCAGGAGGAGACAAAAAGCTGACTCGCTAACAGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGTCCAGCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTAA 3633 0.4685 MDSSTDSNDVPMGGGSDSVGPYPHESDPNPNPNVKYSHSFSPSPFPSVSPAATESGDSATYPLISPTPNQSQEPHRLNSLAISLPSMKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNSTNPEETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPMEERVHVQGPPGGDPSIFAGRSASSIFTPQLWKACGYVPKKFNFQYKEFPFNNDEAAPAQDNGAGAGALVSLSKETDNTAPVLDSSPVEPLVETRSGHLKDADTGKFGSEDVAPRVPTDVKKERTLLRLPAVHNNSKRSKMDFGTSNSKDRSGKKRVRTSDREADPRKRTLHSSKTVLTPTADGKQLDFYEDRGLKIFKADTRSIKNKNLKDIVVQEYVSDDYVAVDTIMEEPNNNLTTTEDSSEPLYPDMTRHGVSVGDVVAEEKTSHKAPTVVEMSSKTDDAVTSALKQNCVGNASVKEKDGDCLVADNADDTLVVKSAASPHTEGHCGSAPELVDNQVSQEDLDRNMRPSSTKCKVKVKRDDDVDNFRKPSNFHSSPISDLKNNEKPSDHTTDIVKVNDAPVPSLPSCENKVGGVDISSEVIPADHTNKPNELSGDFCHRKQELEGSEDSLETQKGFSETKDGSDAAKDPSKSEAIGCPPKVGKSSPTSSTMNSKSLGHDIKSEDTEIPNSLTKHGVMADMHIKNENCPSNAARDENPKKSVKERPKSSLNSNSKGLHSSRSVQNSVSKQVNSDARDSVHVSSSKSLIHQTASILGSSEPNASLHHQKVIQVQNKISSSAPQKVEKPNQTNIHTSSKLNQSHLPTVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSRELEDEAKRIEKEKGPSSSDQRKQDMSYVEDATAREEGLASMTAANPITNNTVSSTSAIANSDPSSPPEDQNLSSMRTSPRNISDDDTATAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYSKGRTAKDAEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 890 904 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 685 699 - -
Pumo3g01759 1210 SUPERFAMILY FYVE/PHD zinc finger 101 159 IPR011011 -
Pumo3g01759 1210 PANTHER UNCHARACTERIZED 87 1202 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 1093 1140 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 566 594 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 817 850 - -
Pumo3g01759 1210 SMART PHD_3 112 155 IPR001965 -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 647 671 - -
Pumo3g01759 1210 ProSitePatterns Zinc finger PHD-type signature. 113 154 IPR019786 -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 1093 1210 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 342 371 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 975 1018 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 749 786 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 1154 1171 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 1 77 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 30 77 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 911 964 - -
Pumo3g01759 1210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 162 IPR013083 -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 647 709 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 876 1028 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 295 378 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 728 786 - -
Pumo3g01759 1210 MobiDBLite consensus disorder prediction 1174 1188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01759 111 154 PHD Transcription Factor Family AT5G22260 44.681 2.80e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01759 - - gmx:100799209 1971.05