Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01752 ATGAGCCTCATCGAGCACCCGAACGTGGTGAGGGCGTACTGCTCCTTCGTGGTGGAGCGGAGCCTGTGGGTGGTGATGGGGTTCATGGCGCAGGGGTCGTGCCTGCACCTCATGAAGGCCGCCTATCCCGAAGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAGACTCTCAAGGCGCTCGATTACCTCCACCGACACGGACACATTCACCGCGACGTTAAGGCCGGGAATATTCTCCTCGATAACAACGGCCAGGTCAAGCTCGCTGACTTCGGCGTCTCCGCTTGCATGTTCGACACCGGCGACCGCCAGCGCTCCCGGAACACCTTCGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAACCGGGAACCGGTTACAATTTCAAGGCGGATATTTGGTCGTTTGGAATTACGGCGTTGGAGTTGGCTCATGGTCATGCGCCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACCATTCAGAATGCTCCTCCGGGGCTTGATTATGATCGTGATAGGAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCAACCGTGGAGAAGTTGCTCAAACACTCCTTCTTCAAACAAGCTAAGCCTCCAGAGCTTTCTGTAAAGAAATTATTTGCTGATTTACCGCCTCTGTGGAACCGTGTAAAATCCCTCCAGCTTAAAGATGCAGCTCAGCTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAGAGTGAATATCAACGAGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAGGCGGCATTGATGCAGGACGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAACTTTTACAAGGGTACAACTGATTCCCAGTTTATTGTGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGTTCACATCACAAGTAGGTAGTAACGACATACCACAGAGTGAGAAAAGAAATGGATCAGTTGCTGAAGCAACACTCTCTACTTTAGAGAATGATGTGGGAACAAGCAAAGTTAAAACTCAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGACGCCAGGCTTAGTGCTTGGTCATTCTTTATCTGAAAGAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAGGTGAGAAAAGTAATCGTAATATACAACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATCAAATCTTCTGGAGGATTCAGAGATTCCTTAGATGATAAGTCTAAGGCTAATTTAGTGCAAATTAAAGGACGATTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGGGATCGCCAATGAGGAAATCTGCGAGTGTCGGTGATTGGATGGTGGATTACAAACAAATGCCAATTGGTCAGTCCTCCAATGATTCTGTCAATATGAATATTCCTGCATCACTTTTAGTGCCTCATCTTCACAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATCTGTTGAATAGCTTGCAAATTGCCGAGGCAATTGACGCTTCTCAGAACGGAAAGTTACCACCATTACCTCGCAATTCAGAGAACAATGGAAGTGTTGATACAGCAGTTTCGGAGAGGGAACAGCTGCTGCTGGCCAAAATTTCAGAACTCCAATCCCGGATGATTAATTTGACCGATGAACTGACTTATGAGAAGTTAAGATACGTGCAGTTGCAACAACAGCTAGCTGCTCTCTACAACCAGGAACAAAATGGGGAAAGAGATGAATTTGCATGA 1923 0.4545 MSLIEHPNVVRAYCSFVVERSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALDYLHRHGHIHRDVKAGNILLDNNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPTVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYQRGVSAWNFDIDDLKAQAALMQDDDDIAEMREEDENKFFNFYKGTTDSQFIVDKKNSNNLQQDEFTSQVGSNDIPQSEKRNGSVAEATLSTLENDVGTSKVKTQSVKLGKTQSGPLTPGLVLGHSLSERGRAFERFENENQLSGEKSNRNIQRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQSSNDSVNMNIPASLLVPHLHNLFQQTSIQQDLIMNLLNSLQIAEAIDASQNGKLPPLPRNSENNGSVDTAVSEREQLLLAKISELQSRMINLTDELTYEKLRYVQLQQQLAALYNQEQNGERDEFA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01752 640 Pfam Protein kinase domain 3 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01752 640 Gene3D Transferase(Phosphotransferase) domain 1 32 263 - -
Pumo3g01752 640 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 32 262 - -
Pumo3g01752 640 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
Pumo3g01752 640 Coils Coil 617 637 - -
Pumo3g01752 640 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 614 IPR047173 GO:0043539
Pumo3g01752 640 SMART serkin_6 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01752 640 SUPERFAMILY Protein kinase-like (PK-like) 1 267 IPR011009 -
Pumo3g01752 640 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01752 Pumo-Chr3 27891846 27900242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01752 1 632 MAP Kinase Kinase Kinase Kinase AT4G10730 64.341 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pumo3g01752 Pkinase 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01752 - - gmx:100783699 1192.95