Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01747 ATGTGGATTGATGATAGTCATAGCATTAATATTGGGAAGGCTGTTCCAGTACACCCTCAAAAGCCAGAGGAACCCGCAAAGCCACCCAAGAAGAGGGCTAGGCCGGGGGAGAGTACTCGACCACGGCCAAAAGATCGTCAGCAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACAAAGTGTCCTCAAGTATTCAGACAAGCTACAGGAGCCAAATGAGCCAAAGCTTATTGAACAGGCAAATGAAGTGGTTCTAAAAGACAGTGGTGTGTCCGATAGCAAAAACTGTGGCATTACATGGGCATATGAAGTGGCACACCAAACAATGCTATGCCCAATTATAGTTGAGGACATGAGTCTACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGAACAGGGTTTCTTCCTTGAGATAATTGACATTATTCGGGGTTTAGGGCTGAGTATCTTGAAAGCCAAGATGGAAAGAAAGAAGAACAAACTATGGGCACGCTTTATTGTTGAGGCAAACAGACACGTGACAAGGATAGATGTGTTTTGGTCCCTAATCCATCTTCTACAGCAAGCAAACACCTCTGGCATTGATTCTTCTAATAAGCATTGCGATGTTATTGATGCCAATATTTAG 702 0.433 MWIDDSHSINIGKAVPVHPQKPEEPAKPPKKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYSDKLQEPNEPKLIEQANEVVLKDSGVSDSKNCGITWAYEVAHQTMLCPIIVEDMSLPGQMLIEMLCEEQGFFLEIIDIIRGLGLSILKAKMERKKNKLWARFIVEANRHVTRIDVFWSLIHLLQQANTSGIDSSNKHCDVIDANI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01747 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Pumo3g01747 233 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 225 IPR043561 GO:0003700|GO:0006355
Pumo3g01747 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 89 IPR036638 GO:0046983
Pumo3g01747 233 MobiDBLite consensus disorder prediction 23 48 - -
Pumo3g01747 233 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01747 Pumo-Chr3 27862567 27864074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01747 2 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 49.774 4.77e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01747 - - gmx:100798158 415.616