Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01746 ATGACAATGGCAATGACAATGCCTCTTACTCTAAGGAATAAGCTCAAGACTCTTTGTACTTGTGGTGATGGCTGGTCTTATGCTATTTTCTGGCGCTTTCATCCACGGAATTCCTTGTTGTTGACTGTGGAAGAAGCATACTATGAAGAGCATCTGGGAGAAGAGATTGCCAACATGCATCCACAGGTCCACTTGCTGGGCGAAGGAATTGTAGGTGAAGCTGCTTTCACGGGAAAGCACAGTTGGGTGCACTCAGATGGTCAAACTCATGATTGGAATTTGACTGGGCAAAATATTTGTGAGGATGATTCTGAATTGCAACAACAGTTCTCCTCTGGGATAAAGACTATTGTGGTTGTACCTGTCAAAGCATGGGGAGTGGTACAGTTTGGATCCAGAAAGAAGATCTTAGAGAGAGTGGAATTTTTGGAGCAAACACAAAGCGTGCTCACGGAGGTGGATGATGACATGGGTATGTTTGACATGTCGGGAAATGCAGTTTTACCACTGGATTATGAAAACAATGATTTAAATGGGTTGTTGGCTTCCATTTCTTCTGCAAGTCCCAGCAATTCCTTCCCTTCCCAATATAAGACTTATGAAGAAGCAATGGCTTCATTGCAAGGAGATTCTTCTTATCTTGGTGACCAATTGAAAGGTACCATGGAAGCTCTAGTTGTATTATCAGATAGGGATAGTGCTGATGTGCTTTTGAAGCCTAACTCTTCTACGAACAACTTAATTGCCGAAAACCCCTATTTTGGTGGTAGTGAATTATCTTCTTTTGATTTGTTGGAGCAACAATTGGTATCCTGTGTAAGGTCACAAGAAGATGCAGATGTGTGTTTTACAAATGAAAATGCATTTGCTACCAGCAAACTTCTAGTTCAGGATTCGGCATTGACCTCATTGTGCAGTATGGACAGAGGGCCATTTCAAGGCAAATTACAAAATTCACTGGATAACCAATATTCAACTCAGTCCAGTGTTGTGACAGATGTTGATTTTTCCTCAAGTTCAAATGCACTGCATGGACTCTCTGAGAACTTAGAGCCAGTTGATATGTCAGAAGAAATTTTGAAATTCAGCTCCATGGAAGATCTTTGCCAGTGGTTTGGTCCCTCTCCCAAGGATAGTATCTGCAAAGCAGTAATTGCATTGGATAACTCCTTTTCTGAATCAACAGAATTTAATCCTACTTCCTTTGATCTGGTTGGAAGTTCTTTAAATGATATTTCAGTGACATGCCTAGCTGGGCATAATTCTAACTCAGATGGGAAAGAAACATCCGTGGTCATGCATAGCTCTGAAAAAGGTCTGTTGGATAGCATGGAACTTGATTTTAGCTATGATCAAGCTGATGAATGGTTGGGGAATATGCTTACACCAGTGGTGAGTGGTGTTACCGATACTGGCTTCTCTGAATGCATATCAGAGCTGAATACTGATACACTGACTGGCACCCGGAAGAGATTATTCTCAGAGTTAGGAATTGAAGAGCTTTTGAGAGGTGGAGCAAATTACAATCCTTTTAGCAGTTCTGAATTTGAGTACGAGTTATCACCCAATAAGAGGCAGCAGTAG 1584 0.4141 MTMAMTMPLTLRNKLKTLCTCGDGWSYAIFWRFHPRNSLLLTVEEAYYEEHLGEEIANMHPQVHLLGEGIVGEAAFTGKHSWVHSDGQTHDWNLTGQNICEDDSELQQQFSSGIKTIVVVPVKAWGVVQFGSRKKILERVEFLEQTQSVLTEVDDDMGMFDMSGNAVLPLDYENNDLNGLLASISSASPSNSFPSQYKTYEEAMASLQGDSSYLGDQLKGTMEALVVLSDRDSADVLLKPNSSTNNLIAENPYFGGSELSSFDLLEQQLVSCVRSQEDADVCFTNENAFATSKLLVQDSALTSLCSMDRGPFQGKLQNSLDNQYSTQSSVVTDVDFSSSSNALHGLSENLEPVDMSEEILKFSSMEDLCQWFGPSPKDSICKAVIALDNSFSESTEFNPTSFDLVGSSLNDISVTCLAGHNSNSDGKETSVVMHSSEKGLLDSMELDFSYDQADEWLGNMLTPVVSGVTDTGFSECISELNTDTLTGTRKRLFSELGIEELLRGGANYNPFSSSEFEYELSPNKRQQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01746 527 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 512 IPR043561 GO:0003700|GO:0006355
Pumo3g01746 527 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 55 149 IPR025610 -
Pumo3g01746 527 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 11 50 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01746 Pumo-Chr3 27859073 27862417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01746 12 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 43.662 1.08e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01746 - - gmx:100798158 928.317