Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01739 ATGGACAAGCACCCAATAAGCAGAGTTAAGCTCGGACACATCCATGATCCAACCCATTCATTTGATGGCTCTAGGTGGTCGCTCGCTCTCTCAACTGGATCCGGGTCATTGACAATCTCAATTGGTAGCCCAACATCAAGGTTTGCTGAAGGGATGGCAACTCGAAGATATGAGTTTGGAAGGATGAATGAGGCTAGCCACCCAGACTCCATCAGAGCCACCTTGGCTGAATTCCTCTGCACTTGCATCTTTGTCTTTATTGGAGAAGGCTCTGTCCTTGCTTTGCGACAAATTTACAAGGAACCAGGCTCATCAGCGGGTGAGCTAGTGGTAATTGCATTAGCTCATGCCTTTGCTATATTTGCTGCAATTTCTGCTAGCACGCACGTGTCTGGTGGACACCTCAACCCTGCGATCACTTTTGGTGCTCTTCTTGGTGGAAGGATCTCCGTCCTTAGAGCCCTTTACTATTGGGTTGCTCAACTTCTCGGTTCTATAGTCGCTGCTCTCTTGTTGAGGCTTGTCACTAACAACATGAGACCACAGGGGTTCAGTGTGTCAATCGGCCTTGGAGCGTTTCACGGTCTTATACTTGAGATTGCCCTCACATTTGGTCTGATGTACACAGTCTATGCAACTGCTATTGATCCTAAAAGGGGCAGCATTGGCACAATTGCACCCTTAGCCATTGCATTCGTTGTTGGGGCAAACATCCTGGCTGGTGGGCCGTTTGATGGAGCATGCATGAACCCTGCTCTGGCTTTTGGGCCTGCCATGGTGGGCTGGAGGTGGCACTACCACTGGATCTTCTGGGTGGGCCCATTGATTGGGGCTGCCCTGGCAGCACTCCTGTATGAGTACGTTATGGTCCCAATTGAGCCTCCTCATCACCAACCTTTGGCTGATGAAGATTACTAG 918 0.5 MDKHPISRVKLGHIHDPTHSFDGSRWSLALSTGSGSLTISIGSPTSRFAEGMATRRYEFGRMNEASHPDSIRATLAEFLCTCIFVFIGEGSVLALRQIYKEPGSSAGELVVIALAHAFAIFAAISASTHVSGGHLNPAITFGALLGGRISVLRALYYWVAQLLGSIVAALLLRLVTNNMRPQGFSVSIGLGAFHGLILEIALTFGLMYTVYATAIDPKRGSIGTIAPLAIAFVVGANILAGGPFDGACMNPALAFGPAMVGWRWHYHWIFWVGPLIGAALAALLYEYVMVPIEPPHHQPLADEDY 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01739 305 CDD MIP 72 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Pumo3g01739 305 SUPERFAMILY Aquaporin-like 63 297 IPR023271 -
Pumo3g01739 305 NCBIfam MIP family channel protein 76 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PANTHER AQUAPORIN-8 58 293 IPR034294 -
Pumo3g01739 305 FunFam Probable aquaporin TIP1-1 55 304 - -
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 231 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 PRINTS Major intrinsic protein family signature 268 288 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g01739 305 Gene3D Glycerol uptake facilitator protein. 56 294 IPR023271 -
Pumo3g01739 305 Pfam Major intrinsic protein 65 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01739 Pumo-Chr3 27666888 27669289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01739 53 305 Major Intrinsic Protein MIP AT1G73190 65.909 3.82e-116 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01739 K09873 - gmx:100797632 464.922