Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01698 ATGGCTTCAATGAATAACCAAGAAGCAATTGAGTTCTTTCATGGCCAAAATCTTTTGTACATGCAGCTATTTGGCCACCTAAGACCTATGTGTCTTAAGTGGGCTGTCCAACTGGGTATTCCAGACATAATACACAATCATGGGAAACCCATTACTCTTCCTGAATTGGTCTCAGCTCTGCAAATTCCACCAGCTAAGGCTTGTTTTGTGCCGCGGTTCATGCGCTTTTTGGCACACAATGGAATCTTTGATATCCATGAAAGCCAAGAAGATCACGAAATAACATATGCTCTTACCCCTGCATCAAAGCTTCTAGTCAACGGCAGTGGCCATTGTTTATCTCCAATGGTTCTAGGGTGTACTGATCCACTTCCGATGAGTACATACCATAAGTTCGGGGAATGGATTCGTGGGGACGACCCCACAGTATATGAGACAGCCTTCGGAACAAGCGTTTGGGGAATTTTTGAGAATAATCCTGCACATATGAGTCTCTTCAATGAGGCTATGGCAAGTGATTCCCAAATGACAGACTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGAGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACCACAGCCACAATTATCTGCGAGGCATTTCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCATGTGGTAGCAAACTTGACAGGATCCAATAACTTGAGTTTTGTCGGTGGCGATATGTTCAAATCTATCCCTCAAGCTGATGCAGTTCTACTAAAGTGGATATTACACAATTGGAATGACGAAAATTGCATAAAGATCCTGAAAAAGTGTAAAGATGCTATTTCAAGCAAAGGCAACAGAGGGAAAGTGATTGTCATAGATGCAGTAATAAATGAGAAGCTAGATGACCGGGATATGACTCAAACAAAGCTTAGTTTGGATATAATTATGTTGACTCATAATGGAAAAGAGCGAAGTGAAAAAGAATGGAAACAAGTCTTCATTGAAGCAGGATTCAAACACTACAAAATATTTCCCATCTTTGGTTTTAGATCTCTGATTGAGCGTGTTCATTGTTCACATTGGCATAAATCATCATATAAGGCAAACCGATCGATGCTACTTACGGAAAGAAAGCAAACTTGTTTAAATAAACAAATATCGATTGCAGTTATGGCTTCAACGAATAACAAAAAAGCAATTGATCAGCTGTTTGAAGGCCAAGCTCTTTTGTACATGCAGCTAGTTGGCAACCTAAGACCTATGTGTCTAAAGTGGGCTGTCCAACTAGGTATTCCAGACATAATATCAAACCATGGCAAACCCATTACTCTTTCTGAGTTGGTCTCAACTCTCCAAATTCCACCATCTAAGGCTTGTTTTGTGCAGCGGCTCATGCGCTTTTTGGCACACAATGGAATCTTTGATATCCATCAGAGCCAAAAAGATCATGAATTGGCATATGCTCTAACCCCTGCTTCGAAGCTTCTTGTCAGTGGCAGTGACCACTGTTTATCTCCAATTGTTCGGTCCATGACTGATCCACTTCTGCTCAGTCTATGCCATCACTTGGGGGAATGGATTTGTGGAGAGGACCCCATAGTATGTGACACAGCCCTCGGAACAAGCTTTTGGGGATTTCTTGAGAAAAATCCTGCATATTTGAGTCTCTTCAATGAGGGTATGACAAGTGATTCTCAAATGGTAGACTTGGCACTCAAAAATTGCAATTCAGTTTTTGAGGGGCTAGATTCCATCGTGGATGTAGGTGGTGGAACTGGAACTACTGCCAGAATTATCTGTGAGGCATTTCCTAAGTTGAAATGTGTTGTGCTTGACCTTCCTCATGTTGTTGCAAACTTGACAGGAACCAATAATTTGAGTTTTGTTGGTGGTGACATGTTCAAATCGATCCCTCAAGCTGATACAGTTCTACTAAAGTGGATTTTACATGATTGGAATGACGAAAATTGCATAAAGATCCTGGAAAAGTGTAAAGATTCTATTTCAAGCAAAGGCAACAGAGGGAAAGTGATTATCATAGATACAGTAATAAATGAGGAGCTAGATGACCGGGGTATGACTCAAACAAAGCTTGGTTTGGATATAATTATGTTGACTATGAATGGGAAAGAGCGAACTGAAAAAGAATGGAAACAACTCTTCATGGAAGCAGGATTCAAACACTACAAAATATTTCCTATCTTTGGTTTTAGATCTCTGATTGAGGTCTATCCTTAA 2229 0.4065 MASMNNQEAIEFFHGQNLLYMQLFGHLRPMCLKWAVQLGIPDIIHNHGKPITLPELVSALQIPPAKACFVPRFMRFLAHNGIFDIHESQEDHEITYALTPASKLLVNGSGHCLSPMVLGCTDPLPMSTYHKFGEWIRGDDPTVYETAFGTSVWGIFENNPAHMSLFNEAMASDSQMTDLALKNCTSVFEELDSIVDVGGGTGTTATIICEAFPKLKCVVLDLPHVVANLTGSNNLSFVGGDMFKSIPQADAVLLKWILHNWNDENCIKILKKCKDAISSKGNRGKVIVIDAVINEKLDDRDMTQTKLSLDIIMLTHNGKERSEKEWKQVFIEAGFKHYKIFPIFGFRSLIERVHCSHWHKSSYKANRSMLLTERKQTCLNKQISIAVMASTNNKKAIDQLFEGQALLYMQLVGNLRPMCLKWAVQLGIPDIISNHGKPITLSELVSTLQIPPSKACFVQRLMRFLAHNGIFDIHQSQKDHELAYALTPASKLLVSGSDHCLSPIVRSMTDPLLLSLCHHLGEWICGEDPIVCDTALGTSFWGFLEKNPAYLSLFNEGMTSDSQMVDLALKNCNSVFEGLDSIVDVGGGTGTTARIICEAFPKLKCVVLDLPHVVANLTGTNNLSFVGGDMFKSIPQADTVLLKWILHDWNDENCIKILEKCKDSISSKGNRGKVIIIDTVINEELDDRGMTQTKLGLDIIMLTMNGKERTEKEWKQLFMEAGFKHYKIFPIFGFRSLIEVYP 742
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01698 742 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pumo3g01698 742 Pfam Dimerisation domain 418 466 IPR012967 GO:0046983
Pumo3g01698 742 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Pumo3g01698 742 FunFam Coniferyl alcohol 9-O-methyltransferase 390 493 - -
Pumo3g01698 742 Gene3D - 1 105 IPR036388 -
Pumo3g01698 742 Gene3D - 388 493 IPR036388 -
Pumo3g01698 742 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 498 741 IPR029063 -
Pumo3g01698 742 FunFam O-methyltransferase ZRP4 107 354 - -
Pumo3g01698 742 Pfam O-methyltransferase domain 518 724 IPR001077 GO:0008171
Pumo3g01698 742 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Pumo3g01698 742 Gene3D Vaccinia Virus protein VP39 495 742 IPR029063 -
Pumo3g01698 742 Gene3D Vaccinia Virus protein VP39 107 353 IPR029063 -
Pumo3g01698 742 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 351 IPR029063 -
Pumo3g01698 742 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Pumo3g01698 742 SUPERFAMILY "Winged helix" DNA-binding domain 398 497 IPR036390 -
Pumo3g01698 742 FunFam O-methyltransferase ZRP4 495 742 - -
Pumo3g01698 742 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 408 742 IPR016461 GO:0008168
Pumo3g01698 742 PANTHER O-METHYLTRANSFERASE 19 339 IPR016461 GO:0008168
Pumo3g01698 742 SUPERFAMILY "Winged helix" DNA-binding domain 12 109 IPR036390 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo3g01698 Pumo-Chr3 26076001 26085449 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01698 405 728 Monolignol Biosynthesis Gene Families AT5G54160 34.036 2.48e-52 184
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01698 K22588 K13262 gmx:100819853 597.816