Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01696 ATGGCTTCAATGAATAACCAAAAAGCAATCGAGCTCTTTGAAGGCCAAGCTCTTTTGTACATGCAACTATTTGGCTACCTAAGACCTATGTGTCTTAAGTGGGCTATCCAACTAGGTATTCCAGACATAATATCCAACCATGGCAAATCCATTAGTCTTTCTGAGTTGGTCTCAGCTCTGCAAATTCCACCAGCTAAGGCTTGTTTTGTGCAGCGGTTCATGCGCTTTTTGGCACACAATGGAATCTTTGATATCCATGAGAGCCAACAAGATCATGAATTAGCATATGCTCTAACCCCTGCTTCAAAGCTTCTAGTCAGTGGCAATGACCACTGTTTATCTCCAATGGTTCGGTTGAATACTGATCCACTTGTGACGAGTACATACCATTACATGGGGGAATGGATTCGTGGGGAGGACCCCACATTATATGAGACAGCCTTAGGGACTACCCTTTGGGGACTTTTTGAGAAAAAACCTACATATATGAGTCTCTTCAATGAGGCTATGGCAAGTGATTCCCAAATGGTAGACTTGGCACTCAAAAATTGCACTTCAGTTTTTGAGGGGCTAGATTCCATCGTGGATGTGGGTGGTGGAACTGGAACCACAGCCACAATTATCTGCGAGGCATTTCCTAAGTTGAATTGTGTTGTGCTTGACCTTCCACATGTTGTAGCAAACTTGTCAGGAAGCAATAATTTAAGTTTTGTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTGATGCAGTTCTACTAAAGTGGGTTTTACATGATTGGAATGACGAAAATTGCATAAAGATCCTGGAAAAGTGTAAAGATTCTATTTCAAGCAAAGGCAACAGAGGGAAAGTGATTATCATAGATACAGTGATAAATGAGAAGCTAGATGACCGGGATATGACTCAAACAAAGCTTAGTTTGGATATAATTATGTTGACTATGAATGGAAAAGAGCGAAGTGAAAAAGAATGGAAACAAGTCTTCATTGAAGCAGGATTCAAACACTACAAAATATTTCCCATCTTTGGTTTTAGATCTCTGATTGAGGTCTATCCTTAA 1065 0.4047 MASMNNQKAIELFEGQALLYMQLFGYLRPMCLKWAIQLGIPDIISNHGKSISLSELVSALQIPPAKACFVQRFMRFLAHNGIFDIHESQQDHELAYALTPASKLLVSGNDHCLSPMVRLNTDPLVTSTYHYMGEWIRGEDPTLYETALGTTLWGLFEKKPTYMSLFNEAMASDSQMVDLALKNCTSVFEGLDSIVDVGGGTGTTATIICEAFPKLNCVVLDLPHVVANLSGSNNLSFVGGDMFKSIPQADAVLLKWVLHDWNDENCIKILEKCKDSISSKGNRGKVIIIDTVINEKLDDRDMTQTKLSLDIIMLTMNGKERSEKEWKQVFIEAGFKHYKIFPIFGFRSLIEVYP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01696 354 FunFam O-methyltransferase ZRP4 107 354 - -
Pumo3g01696 354 PANTHER O-METHYLTRANSFERASE 16 339 IPR016461 GO:0008168
Pumo3g01696 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Pumo3g01696 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 109 IPR036390 -
Pumo3g01696 354 FunFam Coniferyl alcohol 9-O-methyltransferase 2 105 - -
Pumo3g01696 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Pumo3g01696 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pumo3g01696 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Pumo3g01696 354 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Pumo3g01696 354 Gene3D - 1 105 IPR036388 -
Pumo3g01696 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01696 Pumo-Chr3 26061970 26063137 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01696 17 340 Monolignol Biosynthesis Gene Families AT5G54160 33.033 2.24e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01696 K22588 K13262 gmx:100819853 608.601